Gene : Glyma.11G148500 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  1485
Name:  ? Glyma.11G148500 Secondary Identifier:  ? PAC:30530381
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G148500 0.5kb upstream 0.5kb upstream 1379 true Chr11: 11466178-11467556 Glycine max
Glyma.11G148500 0.5kb upstream 0.5kb upstream 500 false Chr11: 11466178-11466677 Glycine max
Glyma.11G148500 0.5kb downstream 0.5kb downstream 1379 true Chr11: 11466678-11468056 Glycine max
Glyma.11G148500 0.5kb downstream 0.5kb downstream 500 false Chr11: 11467557-11468056 Glycine max
Glyma.11G148500 1.0kb upstream 1.0kb upstream 1879 true Chr11: 11465678-11467556 Glycine max
Glyma.11G148500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11465678-11466677 Glycine max
Glyma.11G148500 1.0kb downstream 1.0kb downstream 1879 true Chr11: 11466678-11468556 Glycine max
Glyma.11G148500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11467557-11468556 Glycine max
Glyma.11G148500 2.0kb upstream 2.0kb upstream 2879 true Chr11: 11464678-11467556 Glycine max
Glyma.11G148500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11464678-11466677 Glycine max
Glyma.11G148500 2.0kb downstream 2.0kb downstream 2879 true Chr11: 11466678-11469556 Glycine max
Glyma.11G148500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11467557-11469556 Glycine max
Glyma.11G148500 5.0kb upstream 5.0kb upstream 5879 true Chr11: 11461678-11467556 Glycine max
Glyma.11G148500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11461678-11466677 Glycine max
Glyma.11G148500 5.0kb downstream 5.0kb downstream 5879 true Chr11: 11466678-11472556 Glycine max
Glyma.11G148500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11467557-11472556 Glycine max
Glyma.11G148500 10.0kb upstream 10.0kb upstream 10879 true Chr11: 11456678-11467556 Glycine max
Glyma.11G148500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11456678-11466677 Glycine max
Glyma.11G148500 10.0kb downstream 10.0kb downstream 10879 true Chr11: 11466678-11477556 Glycine max
Glyma.11G148500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11467557-11477556 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.391386 0.0 1.52442    
cufflinks 0.217524 0.0 0.865681 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0538194 0.0 0.231539 Low Low
cufflinks 3.87494 0.0 13.1259    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 30.9491 0.0 83.0563 High High
cufflinks 4.12929 0.0 13.8787    
cufflinks 1.322        
cufflinks 0.581        
cufflinks 0.065     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 11.379     High High
cufflinks 0.046     Low Low
cufflinks 0.323        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.93        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.255        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.711        

0 Strain