Gene : Glyma.11G149100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13878:SF53 - CYTOKININ DEHYDROGENASE 6 Genomic Order:  1491
Name:  ? Glyma.11G149100 Secondary Identifier:  ? PAC:30531602
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G149100 0.5kb upstream 0.5kb upstream 4993 true Chr11: 11563830-11568822 Glycine max
Glyma.11G149100 0.5kb upstream 0.5kb upstream 500 false Chr11: 11563830-11564329 Glycine max
Glyma.11G149100 0.5kb downstream 0.5kb downstream 4993 true Chr11: 11564330-11569322 Glycine max
Glyma.11G149100 0.5kb downstream 0.5kb downstream 500 false Chr11: 11568823-11569322 Glycine max
Glyma.11G149100 1.0kb upstream 1.0kb upstream 5493 true Chr11: 11563330-11568822 Glycine max
Glyma.11G149100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11563330-11564329 Glycine max
Glyma.11G149100 1.0kb downstream 1.0kb downstream 5493 true Chr11: 11564330-11569822 Glycine max
Glyma.11G149100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11568823-11569822 Glycine max
Glyma.11G149100 2.0kb upstream 2.0kb upstream 6493 true Chr11: 11562330-11568822 Glycine max
Glyma.11G149100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11562330-11564329 Glycine max
Glyma.11G149100 2.0kb downstream 2.0kb downstream 6493 true Chr11: 11564330-11570822 Glycine max
Glyma.11G149100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11568823-11570822 Glycine max
Glyma.11G149100 5.0kb upstream 5.0kb upstream 9493 true Chr11: 11559330-11568822 Glycine max
Glyma.11G149100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11559330-11564329 Glycine max
Glyma.11G149100 5.0kb downstream 5.0kb downstream 9493 true Chr11: 11564330-11573822 Glycine max
Glyma.11G149100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11568823-11573822 Glycine max
Glyma.11G149100 10.0kb upstream 10.0kb upstream 14493 true Chr11: 11554330-11568822 Glycine max
Glyma.11G149100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11554330-11564329 Glycine max
Glyma.11G149100 10.0kb downstream 10.0kb downstream 14493 true Chr11: 11564330-11578822 Glycine max
Glyma.11G149100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11568823-11578822 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297373 5265 Fabidae View MSA
124067544 5270 Rosid View MSA
123739719 5271 Pentapetalae View MSA
122789559 5272 Eudicot View MSA
122043660 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.07309 0.0 6.25655    
cufflinks 1.04101 0.0 3.45833    
cufflinks 0.00846535 0.0 0.0374703 Low Low
cufflinks 0.195265 0.0 0.733744    
cufflinks 0.503485 0.0 1.79672    
cufflinks 0.140995 0.0 0.537878 Low  
cufflinks 1.23442 0.0 4.0111    
cufflinks 6.84856 0.0 18.3995   High
cufflinks 0.83326 0.0 2.84208    
cufflinks 0.121        
cufflinks 0.009     Low Low
cufflinks 0.086     Low  
cufflinks 0.204        
cufflinks 0.035     Low  
cufflinks 0.008     Low Low
cufflinks 0.058     Low  
cufflinks 0.153        
cufflinks 0.002     Low Low
cufflinks 0.283        
cufflinks 0.153        
cufflinks 0.047     Low  
cufflinks 0.222        
cufflinks 0.828       High
cufflinks 0.181        
cufflinks 0.049     Low  
cufflinks 0.096        

0 Strain