Gene : Glyma.11G149700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10774:SF61 - ELONGATION DEFECTIVE 1 Genomic Order:  1497
Name:  ? Glyma.11G149700 Secondary Identifier:  ? PAC:30530827
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G149700 0.5kb upstream 0.5kb upstream 9205 true Chr11: 11647215-11656419 Glycine max
Glyma.11G149700 0.5kb upstream 0.5kb upstream 500 false Chr11: 11655920-11656419 Glycine max
Glyma.11G149700 0.5kb downstream 0.5kb downstream 9205 true Chr11: 11646715-11655919 Glycine max
Glyma.11G149700 0.5kb downstream 0.5kb downstream 500 false Chr11: 11646715-11647214 Glycine max
Glyma.11G149700 1.0kb upstream 1.0kb upstream 9705 true Chr11: 11647215-11656919 Glycine max
Glyma.11G149700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11655920-11656919 Glycine max
Glyma.11G149700 1.0kb downstream 1.0kb downstream 9705 true Chr11: 11646215-11655919 Glycine max
Glyma.11G149700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11646215-11647214 Glycine max
Glyma.11G149700 2.0kb upstream 2.0kb upstream 10705 true Chr11: 11647215-11657919 Glycine max
Glyma.11G149700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11655920-11657919 Glycine max
Glyma.11G149700 2.0kb downstream 2.0kb downstream 10705 true Chr11: 11645215-11655919 Glycine max
Glyma.11G149700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11645215-11647214 Glycine max
Glyma.11G149700 5.0kb upstream 5.0kb upstream 13705 true Chr11: 11647215-11660919 Glycine max
Glyma.11G149700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11655920-11660919 Glycine max
Glyma.11G149700 5.0kb downstream 5.0kb downstream 13705 true Chr11: 11642215-11655919 Glycine max
Glyma.11G149700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11642215-11647214 Glycine max
Glyma.11G149700 10.0kb upstream 10.0kb upstream 18705 true Chr11: 11647215-11665919 Glycine max
Glyma.11G149700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11655920-11665919 Glycine max
Glyma.11G149700 10.0kb downstream 10.0kb downstream 18705 true Chr11: 11637215-11655919 Glycine max
Glyma.11G149700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11637215-11647214 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302075 5265 Fabidae View MSA
124074098 5270 Rosid View MSA
123747804 5271 Pentapetalae View MSA
122791335 5272 Eudicot View MSA
122042334 5273 Angiosperm View MSA
121345597 5274 Embryophyte View MSA
123428781 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0127 0.0 44.3672    
cufflinks 14.7314 0.0 43.9773    
cufflinks 11.7327 0.0 35.3108   Low
cufflinks 26.4548 0.0 81.3764 High High
cufflinks 18.7105 0.0 55.6981    
cufflinks 19.7343 0.0 59.2313    
cufflinks 14.5861 0.0 43.292    
cufflinks 26.7618 0.0 82.4889 High High
cufflinks 11.1901 0.0 33.7588   Low
cufflinks 6.839       High
cufflinks 2.783        
cufflinks 2.501       Low
cufflinks 3.651        
cufflinks 3.975        
cufflinks 1.712       Low
cufflinks 4.163        
cufflinks 2.356       Low
cufflinks 3.899        
cufflinks 4.306        
cufflinks 3.754        
cufflinks 3.79        
cufflinks 4.083        
cufflinks 3.587        
cufflinks 2.882        
cufflinks 3.894        
cufflinks 3.009        

0 Strain