Gene : Glyma.11G149900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33790:SF1 - PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15 Genomic Order:  1499
Name:  ? Glyma.11G149900 Secondary Identifier:  ? PAC:30529552
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G149900 0.5kb upstream 0.5kb upstream 3285 true Chr11: 11697964-11701248 Glycine max
Glyma.11G149900 0.5kb upstream 0.5kb upstream 500 false Chr11: 11700749-11701248 Glycine max
Glyma.11G149900 0.5kb downstream 0.5kb downstream 3285 true Chr11: 11697464-11700748 Glycine max
Glyma.11G149900 0.5kb downstream 0.5kb downstream 500 false Chr11: 11697464-11697963 Glycine max
Glyma.11G149900 1.0kb upstream 1.0kb upstream 3785 true Chr11: 11697964-11701748 Glycine max
Glyma.11G149900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11700749-11701748 Glycine max
Glyma.11G149900 1.0kb downstream 1.0kb downstream 3785 true Chr11: 11696964-11700748 Glycine max
Glyma.11G149900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11696964-11697963 Glycine max
Glyma.11G149900 2.0kb upstream 2.0kb upstream 4785 true Chr11: 11697964-11702748 Glycine max
Glyma.11G149900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11700749-11702748 Glycine max
Glyma.11G149900 2.0kb downstream 2.0kb downstream 4785 true Chr11: 11695964-11700748 Glycine max
Glyma.11G149900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11695964-11697963 Glycine max
Glyma.11G149900 5.0kb upstream 5.0kb upstream 7785 true Chr11: 11697964-11705748 Glycine max
Glyma.11G149900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11700749-11705748 Glycine max
Glyma.11G149900 5.0kb downstream 5.0kb downstream 7785 true Chr11: 11692964-11700748 Glycine max
Glyma.11G149900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11692964-11697963 Glycine max
Glyma.11G149900 10.0kb upstream 10.0kb upstream 12785 true Chr11: 11697964-11710748 Glycine max
Glyma.11G149900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11700749-11710748 Glycine max
Glyma.11G149900 10.0kb downstream 10.0kb downstream 12785 true Chr11: 11687964-11700748 Glycine max
Glyma.11G149900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11687964-11697963 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311432 5265 Fabidae View MSA
124070452 5270 Rosid View MSA
123742369 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.566 0.0 90.8209 High  
cufflinks 50.2286 0.0 170.749 High High
cufflinks 46.6913 0.0 158.486 High  
cufflinks 44.5709 0.0 148.826 High  
cufflinks 18.946 0.0 63.3914    
cufflinks 9.61153 0.0 35.8195   Low
cufflinks 41.1265 0.0 136.237 High  
cufflinks 32.9926 0.0 107.946 High  
cufflinks 21.3905 0.0 70.8329 High  
cufflinks 8.494     High  
cufflinks 32.907     High High
cufflinks 13.044     High  
cufflinks 1.89       Low
cufflinks 5.08        
cufflinks 18.648     High  
cufflinks 21.59     High  
cufflinks 1.893       Low
cufflinks 11.331     High  
cufflinks 11.297     High  
cufflinks 34.642     High High
cufflinks 27.538     High  
cufflinks 24.397     High  
cufflinks 9.659     High  
cufflinks 17.093     High  
cufflinks 29.318     High  
cufflinks 8.868     High  

0 Strain