Gene : Glyma.11G151400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24322:SF301 - XANTHOXIN DEHYDROGENASE Genomic Order:  1514
Name:  ? Glyma.11G151400 Secondary Identifier:  ? PAC:30527937
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-695 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G151400 0.5kb upstream 0.5kb upstream 4261 true Chr11: 11960056-11964316 Glycine max
Glyma.11G151400 0.5kb upstream 0.5kb upstream 500 false Chr11: 11963817-11964316 Glycine max
Glyma.11G151400 0.5kb downstream 0.5kb downstream 4261 true Chr11: 11959556-11963816 Glycine max
Glyma.11G151400 0.5kb downstream 0.5kb downstream 500 false Chr11: 11959556-11960055 Glycine max
Glyma.11G151400 1.0kb upstream 1.0kb upstream 4761 true Chr11: 11960056-11964816 Glycine max
Glyma.11G151400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11963817-11964816 Glycine max
Glyma.11G151400 1.0kb downstream 1.0kb downstream 4761 true Chr11: 11959056-11963816 Glycine max
Glyma.11G151400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11959056-11960055 Glycine max
Glyma.11G151400 2.0kb upstream 2.0kb upstream 5761 true Chr11: 11960056-11965816 Glycine max
Glyma.11G151400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11963817-11965816 Glycine max
Glyma.11G151400 2.0kb downstream 2.0kb downstream 5761 true Chr11: 11958056-11963816 Glycine max
Glyma.11G151400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11958056-11960055 Glycine max
Glyma.11G151400 5.0kb upstream 5.0kb upstream 8761 true Chr11: 11960056-11968816 Glycine max
Glyma.11G151400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11963817-11968816 Glycine max
Glyma.11G151400 5.0kb downstream 5.0kb downstream 8761 true Chr11: 11955056-11963816 Glycine max
Glyma.11G151400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11955056-11960055 Glycine max
Glyma.11G151400 10.0kb upstream 10.0kb upstream 13761 true Chr11: 11960056-11973816 Glycine max
Glyma.11G151400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11963817-11973816 Glycine max
Glyma.11G151400 10.0kb downstream 10.0kb downstream 13761 true Chr11: 11950056-11963816 Glycine max
Glyma.11G151400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11950056-11960055 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299815 5265 Fabidae View MSA
124070335 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2072 0.0 51.3812   High
cufflinks 14.1905 0.0 38.3732    
cufflinks 5.78156 0.0 16.9587   Low
cufflinks 8.19479 0.0 23.1617    
cufflinks 10.2459 0.0 28.374    
cufflinks 8.1228 0.0 22.971    
cufflinks 11.0064 0.0 30.3069    
cufflinks 13.4485 0.0 36.4683    
cufflinks 5.84101 0.0 17.1768   Low
cufflinks 5.219        
cufflinks 0.539       Low
cufflinks 3.087        
cufflinks 3.512        
cufflinks 6.08        
cufflinks 0.379       Low
cufflinks 9.305     High  
cufflinks 0.931        
cufflinks 5.433        
cufflinks 7.311        
cufflinks 10.493     High High
cufflinks 0.708       Low
cufflinks 10.524     High High
cufflinks 10.362     High High
cufflinks 0.99        
cufflinks 10.693     High High
cufflinks 0.914       Low

0 Strain