Gene : Glyma.11G151700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24322:SF301 - XANTHOXIN DEHYDROGENASE Genomic Order:  1517
Name:  ? Glyma.11G151700 Secondary Identifier:  ? PAC:30530877
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-695 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G151700 0.5kb upstream 0.5kb upstream 4124 true Chr11: 11999901-12004024 Glycine max
Glyma.11G151700 0.5kb upstream 0.5kb upstream 500 false Chr11: 12003525-12004024 Glycine max
Glyma.11G151700 0.5kb downstream 0.5kb downstream 4124 true Chr11: 11999401-12003524 Glycine max
Glyma.11G151700 0.5kb downstream 0.5kb downstream 500 false Chr11: 11999401-11999900 Glycine max
Glyma.11G151700 1.0kb upstream 1.0kb upstream 4624 true Chr11: 11999901-12004524 Glycine max
Glyma.11G151700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12003525-12004524 Glycine max
Glyma.11G151700 1.0kb downstream 1.0kb downstream 4624 true Chr11: 11998901-12003524 Glycine max
Glyma.11G151700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11998901-11999900 Glycine max
Glyma.11G151700 2.0kb upstream 2.0kb upstream 5624 true Chr11: 11999901-12005524 Glycine max
Glyma.11G151700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12003525-12005524 Glycine max
Glyma.11G151700 2.0kb downstream 2.0kb downstream 5624 true Chr11: 11997901-12003524 Glycine max
Glyma.11G151700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11997901-11999900 Glycine max
Glyma.11G151700 5.0kb upstream 5.0kb upstream 8624 true Chr11: 11999901-12008524 Glycine max
Glyma.11G151700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12003525-12008524 Glycine max
Glyma.11G151700 5.0kb downstream 5.0kb downstream 8624 true Chr11: 11994901-12003524 Glycine max
Glyma.11G151700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11994901-11999900 Glycine max
Glyma.11G151700 10.0kb upstream 10.0kb upstream 13624 true Chr11: 11999901-12013524 Glycine max
Glyma.11G151700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12003525-12013524 Glycine max
Glyma.11G151700 10.0kb downstream 10.0kb downstream 13624 true Chr11: 11989901-12003524 Glycine max
Glyma.11G151700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11989901-11999900 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299815 5265 Fabidae View MSA
124070335 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.88755 0.0 6.58481    
cufflinks 0.983606 0.0 3.59212    
cufflinks 4.39123 0.0 13.7258   High
cufflinks 4.34964 0.0 13.6823   High
cufflinks 1.30356 0.0 4.68004    
cufflinks 0.470686 0.0 1.78256   Low
cufflinks 1.93257 0.0 6.7349    
cufflinks 1.55172 0.0 5.49273    
cufflinks 1.3118 0.0 4.70106    
cufflinks 0.505        
cufflinks 0.067       Low
cufflinks 1.377       High
cufflinks 0.115        
cufflinks 0.04     Low Low
cufflinks 0.079       Low
cufflinks 0.264        
cufflinks 0.719       High
cufflinks 1.06       High
cufflinks 0.465        
cufflinks 0.311        
cufflinks 0.118        
cufflinks 0.393        
cufflinks 0.278        
cufflinks 0.211        
cufflinks 0.352        
cufflinks 0.333        

0 Strain