Gene : Glyma.11G138600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  1386
Name:  ? Glyma.11G138600 Secondary Identifier:  ? PAC:30529138
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G138600 0.5kb upstream 0.5kb upstream 3961 true Chr11: 10540520-10544480 Glycine max
Glyma.11G138600 0.5kb upstream 0.5kb upstream 500 false Chr11: 10543981-10544480 Glycine max
Glyma.11G138600 0.5kb downstream 0.5kb downstream 3961 true Chr11: 10540020-10543980 Glycine max
Glyma.11G138600 0.5kb downstream 0.5kb downstream 500 false Chr11: 10540020-10540519 Glycine max
Glyma.11G138600 1.0kb upstream 1.0kb upstream 4461 true Chr11: 10540520-10544980 Glycine max
Glyma.11G138600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10543981-10544980 Glycine max
Glyma.11G138600 1.0kb downstream 1.0kb downstream 4461 true Chr11: 10539520-10543980 Glycine max
Glyma.11G138600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10539520-10540519 Glycine max
Glyma.11G138600 2.0kb upstream 2.0kb upstream 5461 true Chr11: 10540520-10545980 Glycine max
Glyma.11G138600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10543981-10545980 Glycine max
Glyma.11G138600 2.0kb downstream 2.0kb downstream 5461 true Chr11: 10538520-10543980 Glycine max
Glyma.11G138600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10538520-10540519 Glycine max
Glyma.11G138600 5.0kb upstream 5.0kb upstream 8461 true Chr11: 10540520-10548980 Glycine max
Glyma.11G138600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10543981-10548980 Glycine max
Glyma.11G138600 5.0kb downstream 5.0kb downstream 8461 true Chr11: 10535520-10543980 Glycine max
Glyma.11G138600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10535520-10540519 Glycine max
Glyma.11G138600 10.0kb upstream 10.0kb upstream 13461 true Chr11: 10540520-10553980 Glycine max
Glyma.11G138600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10543981-10553980 Glycine max
Glyma.11G138600 10.0kb downstream 10.0kb downstream 13461 true Chr11: 10530520-10543980 Glycine max
Glyma.11G138600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10530520-10540519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310548 5265 Fabidae View MSA
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.43055 0.0 12.1896   High
cufflinks 2.90089 0.0 8.32704    
cufflinks 2.86191 0.0 8.20153    
cufflinks 1.90939 0.0 5.78117    
cufflinks 1.54716 0.0 4.83972    
cufflinks 0.738688 0.0 2.53908   Low
cufflinks 1.59678 0.0 4.97514    
cufflinks 2.89836 0.0 8.30532    
cufflinks 1.74002 0.0 5.34273    
cufflinks 3.077       High
cufflinks 1.122       Low
cufflinks 2.559        
cufflinks 1.136       Low
cufflinks 1.612        
cufflinks 1.29        
cufflinks 1.993        
cufflinks 1.931        
cufflinks 3.003       High
cufflinks 3.088       High
cufflinks 2.885        
cufflinks 1.159       Low
cufflinks 3.713       High
cufflinks 2.108        
cufflinks 0.942       Low
cufflinks 2.555        
cufflinks 0.953       Low

0 Strain