Gene : Glyma.11G139800 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11937//PTHR11937:SF255 - ACTIN Genomic Order:  1398
Name:  ? Glyma.11G139800 Secondary Identifier:  ? PAC:30529638
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G139800 0.5kb upstream 0.5kb upstream 4271 true Chr11: 10646356-10650626 Glycine max
Glyma.11G139800 0.5kb upstream 0.5kb upstream 500 false Chr11: 10650127-10650626 Glycine max
Glyma.11G139800 0.5kb downstream 0.5kb downstream 4271 true Chr11: 10645856-10650126 Glycine max
Glyma.11G139800 0.5kb downstream 0.5kb downstream 500 false Chr11: 10645856-10646355 Glycine max
Glyma.11G139800 1.0kb upstream 1.0kb upstream 4771 true Chr11: 10646356-10651126 Glycine max
Glyma.11G139800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10650127-10651126 Glycine max
Glyma.11G139800 1.0kb downstream 1.0kb downstream 4771 true Chr11: 10645356-10650126 Glycine max
Glyma.11G139800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10645356-10646355 Glycine max
Glyma.11G139800 2.0kb upstream 2.0kb upstream 5771 true Chr11: 10646356-10652126 Glycine max
Glyma.11G139800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10650127-10652126 Glycine max
Glyma.11G139800 2.0kb downstream 2.0kb downstream 5771 true Chr11: 10644356-10650126 Glycine max
Glyma.11G139800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10644356-10646355 Glycine max
Glyma.11G139800 5.0kb upstream 5.0kb upstream 8771 true Chr11: 10646356-10655126 Glycine max
Glyma.11G139800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10650127-10655126 Glycine max
Glyma.11G139800 5.0kb downstream 5.0kb downstream 8771 true Chr11: 10641356-10650126 Glycine max
Glyma.11G139800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10641356-10646355 Glycine max
Glyma.11G139800 10.0kb upstream 10.0kb upstream 13771 true Chr11: 10646356-10660126 Glycine max
Glyma.11G139800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10650127-10660126 Glycine max
Glyma.11G139800 10.0kb downstream 10.0kb downstream 13771 true Chr11: 10636356-10650126 Glycine max
Glyma.11G139800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10636356-10646355 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254240 5265 Fabidae View MSA
124074063 5270 Rosid View MSA
123752253 5271 Pentapetalae View MSA
122794505 5272 Eudicot View MSA
122049993 5273 Angiosperm View MSA
123429016 5275 Viridiplantae View MSA
121350794 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7447 0.0 34.2394   High
cufflinks 6.31762 0.0 17.8756    
cufflinks 2.93533 0.0 9.17073    
cufflinks 1.55509 0.0 5.28962   Low
cufflinks 6.44836 0.0 18.1611    
cufflinks 10.3457 0.0 28.0653   High
cufflinks 2.0672 0.0 6.7868    
cufflinks 2.5614 0.0 8.15065    
cufflinks 2.59602 0.0 8.25103    
cufflinks 1.484        
cufflinks 0.996        
cufflinks 0.782        
cufflinks 3.99       High
cufflinks 4.681       High
cufflinks 0.5       Low
cufflinks 1.314        
cufflinks 0.879        
cufflinks 2.241        
cufflinks 3.361       High
cufflinks 0.701       Low
cufflinks 1.205        
cufflinks 1.123        
cufflinks 1.012        
cufflinks 1.78        
cufflinks 0.934        
cufflinks 1.089        

0 Strain