Gene : Glyma.11G140000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24128:SF14 - E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Genomic Order:  1400
Name:  ? Glyma.11G140000 Secondary Identifier:  ? PAC:30530361
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G140000 0.5kb upstream 0.5kb upstream 4375 true Chr11: 10662071-10666445 Glycine max
Glyma.11G140000 0.5kb upstream 0.5kb upstream 500 false Chr11: 10665946-10666445 Glycine max
Glyma.11G140000 0.5kb downstream 0.5kb downstream 4375 true Chr11: 10661571-10665945 Glycine max
Glyma.11G140000 0.5kb downstream 0.5kb downstream 500 false Chr11: 10661571-10662070 Glycine max
Glyma.11G140000 1.0kb upstream 1.0kb upstream 4875 true Chr11: 10662071-10666945 Glycine max
Glyma.11G140000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10665946-10666945 Glycine max
Glyma.11G140000 1.0kb downstream 1.0kb downstream 4875 true Chr11: 10661071-10665945 Glycine max
Glyma.11G140000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10661071-10662070 Glycine max
Glyma.11G140000 2.0kb upstream 2.0kb upstream 5875 true Chr11: 10662071-10667945 Glycine max
Glyma.11G140000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10665946-10667945 Glycine max
Glyma.11G140000 2.0kb downstream 2.0kb downstream 5875 true Chr11: 10660071-10665945 Glycine max
Glyma.11G140000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10660071-10662070 Glycine max
Glyma.11G140000 5.0kb upstream 5.0kb upstream 8875 true Chr11: 10662071-10670945 Glycine max
Glyma.11G140000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10665946-10670945 Glycine max
Glyma.11G140000 5.0kb downstream 5.0kb downstream 8875 true Chr11: 10657071-10665945 Glycine max
Glyma.11G140000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10657071-10662070 Glycine max
Glyma.11G140000 10.0kb upstream 10.0kb upstream 13875 true Chr11: 10662071-10675945 Glycine max
Glyma.11G140000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10665946-10675945 Glycine max
Glyma.11G140000 10.0kb downstream 10.0kb downstream 13875 true Chr11: 10652071-10665945 Glycine max
Glyma.11G140000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10652071-10662070 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310561 5265 Fabidae View MSA
124067649 5270 Rosid View MSA
123746800 5271 Pentapetalae View MSA
122791790 5272 Eudicot View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.90673 0.0 13.6969    
cufflinks 8.7973 0.0 23.632    
cufflinks 1.79186 0.0 5.6782   Low
cufflinks 8.70398 0.0 23.3758    
cufflinks 10.514 0.0 28.1015   High
cufflinks 4.13023 0.0 11.7319    
cufflinks 1.20594 0.0 4.04597   Low
cufflinks 6.70207 0.0 18.236    
cufflinks 3.42823 0.0 9.9586    
cufflinks 2.843        
cufflinks 0.291       Low
cufflinks 1.861        
cufflinks 6.785       High
cufflinks 9.908     High High
cufflinks 0.274       Low
cufflinks 1.986        
cufflinks 0.614        
cufflinks 3.663        
cufflinks 4.081        
cufflinks 1.439        
cufflinks 0.407       Low
cufflinks 2.308        
cufflinks 2.165        
cufflinks 0.194       Low
cufflinks 2.255        
cufflinks 1.142        

0 Strain