Gene : Glyma.11G143000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11035 - PTPLA DOMAIN PROTEIN Genomic Order:  1430
Name:  ? Glyma.11G143000 Secondary Identifier:  ? PAC:30528949
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5080 Glycine max pathologic  
Gmax PWY-6433 Glycine max pathologic  
Gmax PWY-6598 Glycine max pathologic  
Gmax PWY-7036 Glycine max pathologic  
Gmax PWY-7601 Glycine max pathologic  
Gmax PWY-7606 Glycine max pathologic  
Gmax PWY-7619 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G143000 0.5kb upstream 0.5kb upstream 4629 true Chr11: 10919161-10923789 Glycine max
Glyma.11G143000 0.5kb upstream 0.5kb upstream 500 false Chr11: 10919161-10919660 Glycine max
Glyma.11G143000 0.5kb downstream 0.5kb downstream 4629 true Chr11: 10919661-10924289 Glycine max
Glyma.11G143000 0.5kb downstream 0.5kb downstream 500 false Chr11: 10923790-10924289 Glycine max
Glyma.11G143000 1.0kb upstream 1.0kb upstream 5129 true Chr11: 10918661-10923789 Glycine max
Glyma.11G143000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10918661-10919660 Glycine max
Glyma.11G143000 1.0kb downstream 1.0kb downstream 5129 true Chr11: 10919661-10924789 Glycine max
Glyma.11G143000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10923790-10924789 Glycine max
Glyma.11G143000 2.0kb upstream 2.0kb upstream 6129 true Chr11: 10917661-10923789 Glycine max
Glyma.11G143000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10917661-10919660 Glycine max
Glyma.11G143000 2.0kb downstream 2.0kb downstream 6129 true Chr11: 10919661-10925789 Glycine max
Glyma.11G143000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10923790-10925789 Glycine max
Glyma.11G143000 5.0kb upstream 5.0kb upstream 9129 true Chr11: 10914661-10923789 Glycine max
Glyma.11G143000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10914661-10919660 Glycine max
Glyma.11G143000 5.0kb downstream 5.0kb downstream 9129 true Chr11: 10919661-10928789 Glycine max
Glyma.11G143000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10923790-10928789 Glycine max
Glyma.11G143000 10.0kb upstream 10.0kb upstream 14129 true Chr11: 10909661-10923789 Glycine max
Glyma.11G143000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10909661-10919660 Glycine max
Glyma.11G143000 10.0kb downstream 10.0kb downstream 14129 true Chr11: 10919661-10933789 Glycine max
Glyma.11G143000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10923790-10933789 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305698 5265 Fabidae View MSA
124067090 5270 Rosid View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2285 0.0 63.3772    
cufflinks 21.4157 0.0 72.9092 High  
cufflinks 27.6576 0.0 92.5008 High High
cufflinks 8.57821 0.0 35.2012    
cufflinks 5.157 0.0 21.0703   Low
cufflinks 11.0563 0.0 42.143    
cufflinks 7.43685 0.0 27.1184    
cufflinks 19.7734 0.0 67.8056    
cufflinks 8.09068 0.0 28.5363    
cufflinks 3.398       High
cufflinks 0.132       Low
cufflinks 2.274        
cufflinks 0.292        
cufflinks 0.204       Low
cufflinks 0.782        
cufflinks 2.631        
cufflinks 0.427        
cufflinks 1.479        
cufflinks 2.496        
cufflinks 2.903        
cufflinks 0.138       Low
cufflinks 2.58        
cufflinks 2.951        
cufflinks 0.085       Low
cufflinks 2.982        
cufflinks 0.183       Low

0 Strain