Gene : Glyma.11G143300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33431:SF2 - GB Genomic Order:  1433
Name:  ? Glyma.11G143300 Secondary Identifier:  ? PAC:30531564
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G143300 0.5kb upstream 0.5kb upstream 3030 true Chr11: 10946738-10949767 Glycine max
Glyma.11G143300 0.5kb upstream 0.5kb upstream 500 false Chr11: 10946738-10947237 Glycine max
Glyma.11G143300 0.5kb downstream 0.5kb downstream 3030 true Chr11: 10947238-10950267 Glycine max
Glyma.11G143300 0.5kb downstream 0.5kb downstream 500 false Chr11: 10949768-10950267 Glycine max
Glyma.11G143300 1.0kb upstream 1.0kb upstream 3530 true Chr11: 10946238-10949767 Glycine max
Glyma.11G143300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10946238-10947237 Glycine max
Glyma.11G143300 1.0kb downstream 1.0kb downstream 3530 true Chr11: 10947238-10950767 Glycine max
Glyma.11G143300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10949768-10950767 Glycine max
Glyma.11G143300 2.0kb upstream 2.0kb upstream 4530 true Chr11: 10945238-10949767 Glycine max
Glyma.11G143300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10945238-10947237 Glycine max
Glyma.11G143300 2.0kb downstream 2.0kb downstream 4530 true Chr11: 10947238-10951767 Glycine max
Glyma.11G143300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10949768-10951767 Glycine max
Glyma.11G143300 5.0kb upstream 5.0kb upstream 7530 true Chr11: 10942238-10949767 Glycine max
Glyma.11G143300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10942238-10947237 Glycine max
Glyma.11G143300 5.0kb downstream 5.0kb downstream 7530 true Chr11: 10947238-10954767 Glycine max
Glyma.11G143300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10949768-10954767 Glycine max
Glyma.11G143300 10.0kb upstream 10.0kb upstream 12530 true Chr11: 10937238-10949767 Glycine max
Glyma.11G143300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10937238-10947237 Glycine max
Glyma.11G143300 10.0kb downstream 10.0kb downstream 12530 true Chr11: 10947238-10959767 Glycine max
Glyma.11G143300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10949768-10959767 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301427 5265 Fabidae View MSA
124070885 5270 Rosid View MSA
123750742 5271 Pentapetalae View MSA
122794296 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.660538 0.0 2.47018    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.45962 0.0 1.74522    
cufflinks 0.0551416 0.0 0.229689 Low  
cufflinks 0.765265 0.0 2.8406    
cufflinks 11.8038 0.0 32.8913   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0197432 0.0 0.0893569 Low Low
cufflinks 0.825482 0.0 3.04962    
cufflinks 0.045     Low  
cufflinks 6.048     High High
cufflinks 0.214        
cufflinks 0.789        
cufflinks 0.431        
cufflinks 2.11        
cufflinks 0.034     Low  
cufflinks 3.409       High
cufflinks 0.422        
cufflinks 0.015     Low Low
cufflinks 0.007     Low Low
cufflinks 2.142        
cufflinks 0.039     Low  
cufflinks 0.034     Low  
cufflinks 3.423       High
cufflinks 0.011     Low Low
cufflinks 6.901     High High

0 Strain