Gene : Glyma.11G196600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR18952:SF111 - ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  1966
Name:  ? Glyma.11G196600 Secondary Identifier:  ? PAC:30529292
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYANCAT-PWY Glycine max pathologic  
Gmax PWY-241 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  
Gmax PWYQT-4429 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G196600 0.5kb upstream 0.5kb upstream 3081 true Chr11: 27091233-27094313 Glycine max
Glyma.11G196600 0.5kb upstream 0.5kb upstream 500 false Chr11: 27091233-27091732 Glycine max
Glyma.11G196600 0.5kb downstream 0.5kb downstream 3081 true Chr11: 27091733-27094813 Glycine max
Glyma.11G196600 0.5kb downstream 0.5kb downstream 500 false Chr11: 27094314-27094813 Glycine max
Glyma.11G196600 1.0kb upstream 1.0kb upstream 3581 true Chr11: 27090733-27094313 Glycine max
Glyma.11G196600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 27090733-27091732 Glycine max
Glyma.11G196600 1.0kb downstream 1.0kb downstream 3581 true Chr11: 27091733-27095313 Glycine max
Glyma.11G196600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 27094314-27095313 Glycine max
Glyma.11G196600 2.0kb upstream 2.0kb upstream 4581 true Chr11: 27089733-27094313 Glycine max
Glyma.11G196600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 27089733-27091732 Glycine max
Glyma.11G196600 2.0kb downstream 2.0kb downstream 4581 true Chr11: 27091733-27096313 Glycine max
Glyma.11G196600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 27094314-27096313 Glycine max
Glyma.11G196600 5.0kb upstream 5.0kb upstream 7581 true Chr11: 27086733-27094313 Glycine max
Glyma.11G196600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 27086733-27091732 Glycine max
Glyma.11G196600 5.0kb downstream 5.0kb downstream 7581 true Chr11: 27091733-27099313 Glycine max
Glyma.11G196600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 27094314-27099313 Glycine max
Glyma.11G196600 10.0kb upstream 10.0kb upstream 12581 true Chr11: 27081733-27094313 Glycine max
Glyma.11G196600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 27081733-27091732 Glycine max
Glyma.11G196600 10.0kb downstream 10.0kb downstream 12581 true Chr11: 27091733-27104313 Glycine max
Glyma.11G196600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 27094314-27104313 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310982 5265 Fabidae View MSA
124071031 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.075332 0.0 0.310784 Low  
cufflinks 0.0131889 0.0 0.0634127 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0458717 0.0 0.196584 Low  
cufflinks 0.0867091 0.0 0.355686 Low  
cufflinks 0.0729363 0.0 0.302047 Low  
cufflinks 0.0489271 0.0 0.20852 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.162        
cufflinks 0.006     Low  
cufflinks 0.006     Low  
cufflinks 0.005     Low Low
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.094        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.236       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.329       High

0 Strain