Gene : Glyma.11G196700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR18952:SF111 - ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  1967
Name:  ? Glyma.11G196700 Secondary Identifier:  ? PAC:30529310
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYANCAT-PWY Glycine max pathologic  
Gmax PWY-241 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  
Gmax PWYQT-4429 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G196700 0.5kb upstream 0.5kb upstream 3355 true Chr11: 27098076-27101430 Glycine max
Glyma.11G196700 0.5kb upstream 0.5kb upstream 500 false Chr11: 27100931-27101430 Glycine max
Glyma.11G196700 0.5kb downstream 0.5kb downstream 3355 true Chr11: 27097576-27100930 Glycine max
Glyma.11G196700 0.5kb downstream 0.5kb downstream 500 false Chr11: 27097576-27098075 Glycine max
Glyma.11G196700 1.0kb upstream 1.0kb upstream 3855 true Chr11: 27098076-27101930 Glycine max
Glyma.11G196700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 27100931-27101930 Glycine max
Glyma.11G196700 1.0kb downstream 1.0kb downstream 3855 true Chr11: 27097076-27100930 Glycine max
Glyma.11G196700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 27097076-27098075 Glycine max
Glyma.11G196700 2.0kb upstream 2.0kb upstream 4855 true Chr11: 27098076-27102930 Glycine max
Glyma.11G196700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 27100931-27102930 Glycine max
Glyma.11G196700 2.0kb downstream 2.0kb downstream 4855 true Chr11: 27096076-27100930 Glycine max
Glyma.11G196700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 27096076-27098075 Glycine max
Glyma.11G196700 5.0kb upstream 5.0kb upstream 7855 true Chr11: 27098076-27105930 Glycine max
Glyma.11G196700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 27100931-27105930 Glycine max
Glyma.11G196700 5.0kb downstream 5.0kb downstream 7855 true Chr11: 27093076-27100930 Glycine max
Glyma.11G196700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 27093076-27098075 Glycine max
Glyma.11G196700 10.0kb upstream 10.0kb upstream 12855 true Chr11: 27098076-27110930 Glycine max
Glyma.11G196700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 27100931-27110930 Glycine max
Glyma.11G196700 10.0kb downstream 10.0kb downstream 12855 true Chr11: 27088076-27100930 Glycine max
Glyma.11G196700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 27088076-27098075 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310982 5265 Fabidae View MSA
124071031 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.72531 0.0 6.12596    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 10.002 0.0 28.5927    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.038        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain