Gene : Glyma.11G197300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24298:SF1 - CYTOCHROME P450, FAMILY 79, SUBFAMILY C, POLYPEPTIDE 1-RELATED Genomic Order:  1973
Name:  ? Glyma.11G197300 Secondary Identifier:  ? PAC:30527679
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5990 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G197300 0.5kb upstream 0.5kb upstream 2952 true Chr11: 27293482-27296433 Glycine max
Glyma.11G197300 0.5kb upstream 0.5kb upstream 500 false Chr11: 27293482-27293981 Glycine max
Glyma.11G197300 0.5kb downstream 0.5kb downstream 2952 true Chr11: 27293982-27296933 Glycine max
Glyma.11G197300 0.5kb downstream 0.5kb downstream 500 false Chr11: 27296434-27296933 Glycine max
Glyma.11G197300 1.0kb upstream 1.0kb upstream 3452 true Chr11: 27292982-27296433 Glycine max
Glyma.11G197300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 27292982-27293981 Glycine max
Glyma.11G197300 1.0kb downstream 1.0kb downstream 3452 true Chr11: 27293982-27297433 Glycine max
Glyma.11G197300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 27296434-27297433 Glycine max
Glyma.11G197300 2.0kb upstream 2.0kb upstream 4452 true Chr11: 27291982-27296433 Glycine max
Glyma.11G197300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 27291982-27293981 Glycine max
Glyma.11G197300 2.0kb downstream 2.0kb downstream 4452 true Chr11: 27293982-27298433 Glycine max
Glyma.11G197300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 27296434-27298433 Glycine max
Glyma.11G197300 5.0kb upstream 5.0kb upstream 7452 true Chr11: 27288982-27296433 Glycine max
Glyma.11G197300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 27288982-27293981 Glycine max
Glyma.11G197300 5.0kb downstream 5.0kb downstream 7452 true Chr11: 27293982-27301433 Glycine max
Glyma.11G197300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 27296434-27301433 Glycine max
Glyma.11G197300 10.0kb upstream 10.0kb upstream 12452 true Chr11: 27283982-27296433 Glycine max
Glyma.11G197300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 27283982-27293981 Glycine max
Glyma.11G197300 10.0kb downstream 10.0kb downstream 12452 true Chr11: 27293982-27306433 Glycine max
Glyma.11G197300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 27296434-27306433 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311792 5265 Fabidae View MSA
124074908 5270 Rosid View MSA
123753669 5271 Pentapetalae View MSA
122797866 5272 Eudicot View MSA
122051653 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121351760 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0707707 0.0 0.282686 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0988023 0.0 0.389567 Low  
cufflinks 0.793244 0.0 2.82871   High
cufflinks 0.00175014 0.0 0.0103182 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00318285 0.0 0.0164572 Low  
cufflinks 1.507        
cufflinks 0.868        
cufflinks 1.086        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.589        
cufflinks 0.111       Low
cufflinks 1.49        
cufflinks 2.488        
cufflinks 3.386       High
cufflinks 0.053     Low Low
cufflinks 0.21        
cufflinks 0.03     Low Low
cufflinks 10.403     High High
cufflinks 0.405        
cufflinks 0.138        
cufflinks 0.797        

0 Strain