Gene : Glyma.11G197400 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24298:SF1 - CYTOCHROME P450, FAMILY 79, SUBFAMILY C, POLYPEPTIDE 1-RELATED Genomic Order:  1974
Name:  ? Glyma.11G197400 Secondary Identifier:  ? PAC:30528623
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5990 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G197400 0.5kb upstream 0.5kb upstream 2812 true Chr11: 27385497-27388308 Glycine max
Glyma.11G197400 0.5kb upstream 0.5kb upstream 500 false Chr11: 27385497-27385996 Glycine max
Glyma.11G197400 0.5kb downstream 0.5kb downstream 2812 true Chr11: 27385997-27388808 Glycine max
Glyma.11G197400 0.5kb downstream 0.5kb downstream 500 false Chr11: 27388309-27388808 Glycine max
Glyma.11G197400 1.0kb upstream 1.0kb upstream 3312 true Chr11: 27384997-27388308 Glycine max
Glyma.11G197400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 27384997-27385996 Glycine max
Glyma.11G197400 1.0kb downstream 1.0kb downstream 3312 true Chr11: 27385997-27389308 Glycine max
Glyma.11G197400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 27388309-27389308 Glycine max
Glyma.11G197400 2.0kb upstream 2.0kb upstream 4312 true Chr11: 27383997-27388308 Glycine max
Glyma.11G197400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 27383997-27385996 Glycine max
Glyma.11G197400 2.0kb downstream 2.0kb downstream 4312 true Chr11: 27385997-27390308 Glycine max
Glyma.11G197400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 27388309-27390308 Glycine max
Glyma.11G197400 5.0kb upstream 5.0kb upstream 7312 true Chr11: 27380997-27388308 Glycine max
Glyma.11G197400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 27380997-27385996 Glycine max
Glyma.11G197400 5.0kb downstream 5.0kb downstream 7312 true Chr11: 27385997-27393308 Glycine max
Glyma.11G197400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 27388309-27393308 Glycine max
Glyma.11G197400 10.0kb upstream 10.0kb upstream 12312 true Chr11: 27375997-27388308 Glycine max
Glyma.11G197400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 27375997-27385996 Glycine max
Glyma.11G197400 10.0kb downstream 10.0kb downstream 12312 true Chr11: 27385997-27398308 Glycine max
Glyma.11G197400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 27388309-27398308 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311792 5265 Fabidae View MSA
124074908 5270 Rosid View MSA
123753669 5271 Pentapetalae View MSA
122797866 5272 Eudicot View MSA
122051653 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121351760 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0244664 0.0 0.104263 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.604385 0.0 2.20354    
cufflinks 0.0777298 0.0 0.310189 Low  
cufflinks 0.252568 0.0 0.963783    
cufflinks 13.9882 0.0 37.43   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.107008 0.0 0.422255 Low  
cufflinks 0.121104 0.0 0.475956 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.287       High
cufflinks 0.914       High
cufflinks 0.202        
cufflinks 0.023     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.251       High
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.007     Low Low
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain