Gene : Glyma.11G199100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24031:SF306 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 11 Genomic Order:  1991
Name:  ? Glyma.11G199100 Secondary Identifier:  ? PAC:30531204
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G199100 0.5kb upstream 0.5kb upstream 11990 true Chr11: 27705789-27717778 Glycine max
Glyma.11G199100 0.5kb upstream 0.5kb upstream 500 false Chr11: 27705789-27706288 Glycine max
Glyma.11G199100 0.5kb downstream 0.5kb downstream 11990 true Chr11: 27706289-27718278 Glycine max
Glyma.11G199100 0.5kb downstream 0.5kb downstream 500 false Chr11: 27717779-27718278 Glycine max
Glyma.11G199100 1.0kb upstream 1.0kb upstream 12490 true Chr11: 27705289-27717778 Glycine max
Glyma.11G199100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 27705289-27706288 Glycine max
Glyma.11G199100 1.0kb downstream 1.0kb downstream 12490 true Chr11: 27706289-27718778 Glycine max
Glyma.11G199100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 27717779-27718778 Glycine max
Glyma.11G199100 2.0kb upstream 2.0kb upstream 13490 true Chr11: 27704289-27717778 Glycine max
Glyma.11G199100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 27704289-27706288 Glycine max
Glyma.11G199100 2.0kb downstream 2.0kb downstream 13490 true Chr11: 27706289-27719778 Glycine max
Glyma.11G199100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 27717779-27719778 Glycine max
Glyma.11G199100 5.0kb upstream 5.0kb upstream 16490 true Chr11: 27701289-27717778 Glycine max
Glyma.11G199100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 27701289-27706288 Glycine max
Glyma.11G199100 5.0kb downstream 5.0kb downstream 16490 true Chr11: 27706289-27722778 Glycine max
Glyma.11G199100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 27717779-27722778 Glycine max
Glyma.11G199100 10.0kb upstream 10.0kb upstream 21490 true Chr11: 27696289-27717778 Glycine max
Glyma.11G199100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 27696289-27706288 Glycine max
Glyma.11G199100 10.0kb downstream 10.0kb downstream 21490 true Chr11: 27706289-27727778 Glycine max
Glyma.11G199100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 27717779-27727778 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305486 5265 Fabidae View MSA
124070634 5270 Rosid View MSA
123742512 5271 Pentapetalae View MSA
122795346 5272 Eudicot View MSA
122048298 5273 Angiosperm View MSA
121348302 5274 Embryophyte View MSA
123425824 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.62646 0.0 27.9599    
cufflinks 9.05213 0.0 32.3556    
cufflinks 8.11702 0.0 29.5446    
cufflinks 10.7562 0.0 38.4072    
cufflinks 5.48168 0.0 21.3622    
cufflinks 2.41963 0.0 10.0979   Low
cufflinks 15.6245 0.0 55.4926   High
cufflinks 7.56476 0.0 28.0365    
cufflinks 5.32505 0.0 20.7696    
cufflinks 0.596        
cufflinks 0.121       Low
cufflinks 0.858        
cufflinks 0.444        
cufflinks 0.524        
cufflinks 0.334        
cufflinks 1.281       High
cufflinks 0.245        
cufflinks 0.884        
cufflinks 1.131        
cufflinks 1.426       High
cufflinks 0.182       Low
cufflinks 1.31       High
cufflinks 1.294       High
cufflinks 0.155       Low
cufflinks 1.234        
cufflinks 0.282        

0 Strain