Gene : Glyma.11G202600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10209:SF226 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  2026
Name:  ? Glyma.11G202600 Secondary Identifier:  ? PAC:30530062
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5125 Glycine max pathologic  
Gmax PWY-641 Glycine max pathologic  
Gmax PWY-7267 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G202600 0.5kb upstream 0.5kb upstream 3407 true Chr11: 28329084-28332490 Glycine max
Glyma.11G202600 0.5kb upstream 0.5kb upstream 500 false Chr11: 28331991-28332490 Glycine max
Glyma.11G202600 0.5kb downstream 0.5kb downstream 3407 true Chr11: 28328584-28331990 Glycine max
Glyma.11G202600 0.5kb downstream 0.5kb downstream 500 false Chr11: 28328584-28329083 Glycine max
Glyma.11G202600 1.0kb upstream 1.0kb upstream 3907 true Chr11: 28329084-28332990 Glycine max
Glyma.11G202600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 28331991-28332990 Glycine max
Glyma.11G202600 1.0kb downstream 1.0kb downstream 3907 true Chr11: 28328084-28331990 Glycine max
Glyma.11G202600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 28328084-28329083 Glycine max
Glyma.11G202600 2.0kb upstream 2.0kb upstream 4907 true Chr11: 28329084-28333990 Glycine max
Glyma.11G202600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 28331991-28333990 Glycine max
Glyma.11G202600 2.0kb downstream 2.0kb downstream 4907 true Chr11: 28327084-28331990 Glycine max
Glyma.11G202600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 28327084-28329083 Glycine max
Glyma.11G202600 5.0kb upstream 5.0kb upstream 7907 true Chr11: 28329084-28336990 Glycine max
Glyma.11G202600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 28331991-28336990 Glycine max
Glyma.11G202600 5.0kb downstream 5.0kb downstream 7907 true Chr11: 28324084-28331990 Glycine max
Glyma.11G202600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 28324084-28329083 Glycine max
Glyma.11G202600 10.0kb upstream 10.0kb upstream 12907 true Chr11: 28329084-28341990 Glycine max
Glyma.11G202600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 28331991-28341990 Glycine max
Glyma.11G202600 10.0kb downstream 10.0kb downstream 12907 true Chr11: 28319084-28331990 Glycine max
Glyma.11G202600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 28319084-28329083 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026742 5273 Angiosperm View MSA
122303051 5265 Fabidae View MSA
124062764 5270 Rosid View MSA
123736643 5271 Pentapetalae View MSA
122786747 5272 Eudicot View MSA
121347125 5274 Embryophyte View MSA
123380497 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.29557 0.0 18.2623    
cufflinks 3.44017 0.0 10.8997   Low
cufflinks 9.20148 0.0 25.7728   High
cufflinks 6.1921 0.0 18.0596    
cufflinks 6.00197 0.0 17.4384    
cufflinks 4.65244 0.0 14.0478    
cufflinks 3.89276 0.0 12.0367   Low
cufflinks 5.51874 0.0 16.3048    
cufflinks 4.24992 0.0 13.0078    
cufflinks 1.695        
cufflinks 3.084       High
cufflinks 2.221        
cufflinks 1.961        
cufflinks 2.139        
cufflinks 1.808        
cufflinks 1.194       Low
cufflinks 1.028       Low
cufflinks 1.888        
cufflinks 1.392        
cufflinks 1.37        
cufflinks 2.102        
cufflinks 1.574        
cufflinks 1.453        
cufflinks 2.706       High
cufflinks 1.26       Low
cufflinks 1.892        

0 Strain