Gene : Glyma.11G189100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21022//PTHR21022:SF5 - PREPHENATE DEHYDRATASE P PROTEIN Genomic Order:  1891
Name:  ? Glyma.11G189100 Secondary Identifier:  ? PAC:30527792
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3462 Glycine max pathologic  
Gmax PWY-3481 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G189100 0.5kb upstream 0.5kb upstream 2923 true Chr11: 26084390-26087312 Glycine max
Glyma.11G189100 0.5kb upstream 0.5kb upstream 500 false Chr11: 26084390-26084889 Glycine max
Glyma.11G189100 0.5kb downstream 0.5kb downstream 2923 true Chr11: 26084890-26087812 Glycine max
Glyma.11G189100 0.5kb downstream 0.5kb downstream 500 false Chr11: 26087313-26087812 Glycine max
Glyma.11G189100 1.0kb upstream 1.0kb upstream 3423 true Chr11: 26083890-26087312 Glycine max
Glyma.11G189100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 26083890-26084889 Glycine max
Glyma.11G189100 1.0kb downstream 1.0kb downstream 3423 true Chr11: 26084890-26088312 Glycine max
Glyma.11G189100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 26087313-26088312 Glycine max
Glyma.11G189100 2.0kb upstream 2.0kb upstream 4423 true Chr11: 26082890-26087312 Glycine max
Glyma.11G189100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 26082890-26084889 Glycine max
Glyma.11G189100 2.0kb downstream 2.0kb downstream 4423 true Chr11: 26084890-26089312 Glycine max
Glyma.11G189100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 26087313-26089312 Glycine max
Glyma.11G189100 5.0kb upstream 5.0kb upstream 7423 true Chr11: 26079890-26087312 Glycine max
Glyma.11G189100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 26079890-26084889 Glycine max
Glyma.11G189100 5.0kb downstream 5.0kb downstream 7423 true Chr11: 26084890-26092312 Glycine max
Glyma.11G189100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 26087313-26092312 Glycine max
Glyma.11G189100 10.0kb upstream 10.0kb upstream 12423 true Chr11: 26074890-26087312 Glycine max
Glyma.11G189100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 26074890-26084889 Glycine max
Glyma.11G189100 10.0kb downstream 10.0kb downstream 12423 true Chr11: 26084890-26097312 Glycine max
Glyma.11G189100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 26087313-26097312 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298172 5265 Fabidae View MSA
124066223 5270 Rosid View MSA
123745222 5271 Pentapetalae View MSA
122787752 5272 Eudicot View MSA
122046279 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.834029 0.0 2.93921   Low
cufflinks 1.69623 0.0 5.54963    
cufflinks 2.8563 0.0 8.75207   High
cufflinks 2.45472 0.0 7.62426    
cufflinks 1.8742 0.0 5.98226    
cufflinks 1.65591 0.0 5.40746    
cufflinks 2.12674 0.0 6.70322    
cufflinks 1.95125 0.0 6.26585    
cufflinks 1.25857 0.0 4.25781    
cufflinks 1.092       High
cufflinks 0.062       Low
cufflinks 2.15       High
cufflinks 1.213       High
cufflinks 0.438        
cufflinks 0.076       Low
cufflinks 0.201        
cufflinks 0.581        
cufflinks 0.495        
cufflinks 0.795        
cufflinks 0.14        
cufflinks 0.087       Low
cufflinks 0.229        
cufflinks 0.572        
cufflinks 0.144        
cufflinks 0.128        
cufflinks 0.242        

0 Strain