Gene : Glyma.11G189500 G. max Wm82.a2.v1
Defline:  (1 of 34) 3.5.1.98 - Histone deacetylase / HDAC Genomic Order:  1895
Name:  ? Glyma.11G189500 Secondary Identifier:  ? PAC:30531545
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G189500 0.5kb upstream 0.5kb upstream 3622 true Chr11: 26159766-26163387 Glycine max
Glyma.11G189500 0.5kb upstream 0.5kb upstream 500 false Chr11: 26159766-26160265 Glycine max
Glyma.11G189500 0.5kb downstream 0.5kb downstream 3622 true Chr11: 26160266-26163887 Glycine max
Glyma.11G189500 0.5kb downstream 0.5kb downstream 500 false Chr11: 26163388-26163887 Glycine max
Glyma.11G189500 1.0kb upstream 1.0kb upstream 4122 true Chr11: 26159266-26163387 Glycine max
Glyma.11G189500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 26159266-26160265 Glycine max
Glyma.11G189500 1.0kb downstream 1.0kb downstream 4122 true Chr11: 26160266-26164387 Glycine max
Glyma.11G189500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 26163388-26164387 Glycine max
Glyma.11G189500 2.0kb upstream 2.0kb upstream 5122 true Chr11: 26158266-26163387 Glycine max
Glyma.11G189500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 26158266-26160265 Glycine max
Glyma.11G189500 2.0kb downstream 2.0kb downstream 5122 true Chr11: 26160266-26165387 Glycine max
Glyma.11G189500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 26163388-26165387 Glycine max
Glyma.11G189500 5.0kb upstream 5.0kb upstream 8122 true Chr11: 26155266-26163387 Glycine max
Glyma.11G189500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 26155266-26160265 Glycine max
Glyma.11G189500 5.0kb downstream 5.0kb downstream 8122 true Chr11: 26160266-26168387 Glycine max
Glyma.11G189500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 26163388-26168387 Glycine max
Glyma.11G189500 10.0kb upstream 10.0kb upstream 13122 true Chr11: 26150266-26163387 Glycine max
Glyma.11G189500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 26150266-26160265 Glycine max
Glyma.11G189500 10.0kb downstream 10.0kb downstream 13122 true Chr11: 26160266-26173387 Glycine max
Glyma.11G189500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 26163388-26173387 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313327 5265 Fabidae View MSA
124068201 5270 Rosid View MSA
123749750 5271 Pentapetalae View MSA
122797243 5272 Eudicot View MSA
122051478 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121349885 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.1053 0.0 80.4749 High  
cufflinks 23.1636 0.0 61.8147 High  
cufflinks 9.23873 0.0 25.8565   Low
cufflinks 15.6868 0.0 42.2633    
cufflinks 69.088 0.0 195.218 High High
cufflinks 52.8046 0.0 145.199 High High
cufflinks 21.8826 0.0 58.4322 High  
cufflinks 25.6007 0.0 68.3063 High  
cufflinks 38.8984 0.0 104.906 High  
cufflinks 5.992        
cufflinks 1.524        
cufflinks 9.089     High  
cufflinks 50.451     High High
cufflinks 70.943     High High
cufflinks 1.574        
cufflinks 2.787        
cufflinks 5.807        
cufflinks 6.111        
cufflinks 12.318     High  
cufflinks 0.966       Low
cufflinks 2.941        
cufflinks 1.756        
cufflinks 4.581        
cufflinks 1.695        
cufflinks 1.884        
cufflinks 5.555        

0 Strain