Gene : Glyma.11G192100 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG3484 - Cyclin-dependent protein kinase CDC28, regulatory subunit CKS1, and related proteins Genomic Order:  1921
Name:  ? Glyma.11G192100 Secondary Identifier:  ? PAC:30531192
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G192100 0.5kb upstream 0.5kb upstream 1942 true Chr11: 26537647-26539588 Glycine max
Glyma.11G192100 0.5kb upstream 0.5kb upstream 500 false Chr11: 26537647-26538146 Glycine max
Glyma.11G192100 0.5kb downstream 0.5kb downstream 1942 true Chr11: 26538147-26540088 Glycine max
Glyma.11G192100 0.5kb downstream 0.5kb downstream 500 false Chr11: 26539589-26540088 Glycine max
Glyma.11G192100 1.0kb upstream 1.0kb upstream 2442 true Chr11: 26537147-26539588 Glycine max
Glyma.11G192100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 26537147-26538146 Glycine max
Glyma.11G192100 1.0kb downstream 1.0kb downstream 2442 true Chr11: 26538147-26540588 Glycine max
Glyma.11G192100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 26539589-26540588 Glycine max
Glyma.11G192100 2.0kb upstream 2.0kb upstream 3442 true Chr11: 26536147-26539588 Glycine max
Glyma.11G192100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 26536147-26538146 Glycine max
Glyma.11G192100 2.0kb downstream 2.0kb downstream 3442 true Chr11: 26538147-26541588 Glycine max
Glyma.11G192100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 26539589-26541588 Glycine max
Glyma.11G192100 5.0kb upstream 5.0kb upstream 6442 true Chr11: 26533147-26539588 Glycine max
Glyma.11G192100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 26533147-26538146 Glycine max
Glyma.11G192100 5.0kb downstream 5.0kb downstream 6442 true Chr11: 26538147-26544588 Glycine max
Glyma.11G192100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 26539589-26544588 Glycine max
Glyma.11G192100 10.0kb upstream 10.0kb upstream 11442 true Chr11: 26528147-26539588 Glycine max
Glyma.11G192100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 26528147-26538146 Glycine max
Glyma.11G192100 10.0kb downstream 10.0kb downstream 11442 true Chr11: 26538147-26549588 Glycine max
Glyma.11G192100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 26539589-26549588 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304336 5265 Fabidae View MSA
124061080 5270 Rosid View MSA
123739192 5271 Pentapetalae View MSA
122791805 5272 Eudicot View MSA
122049124 5273 Angiosperm View MSA
121351366 5274 Embryophyte View MSA
123427674 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.9597 0.0 63.4559 High Low
cufflinks 84.5183 0.0 228.091 High High
cufflinks 33.8833 0.0 91.247 High Low
cufflinks 39.5501 0.0 105.958 High  
cufflinks 62.7553 0.0 167.709 High  
cufflinks 65.1438 0.0 174.243 High  
cufflinks 60.7418 0.0 162.184 High  
cufflinks 56.8869 0.0 151.828 High  
cufflinks 60.4113 0.0 161.347 High  
cufflinks 21.933     High  
cufflinks 5.993     High Low
cufflinks 19.199     High  
cufflinks 33.7     High High
cufflinks 39.587     High High
cufflinks 4.34       Low
cufflinks 23.618     High  
cufflinks 11.228     High  
cufflinks 20.259     High  
cufflinks 38.057     High High
cufflinks 19.038     High  
cufflinks 7.527     High Low
cufflinks 23.211     High  
cufflinks 33.739     High High
cufflinks 7.363     High Low
cufflinks 20.887     High  
cufflinks 8.849     High  

0 Strain