Gene : Glyma.11G192700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10003:SF34 - SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Genomic Order:  1927
Name:  ? Glyma.11G192700 Secondary Identifier:  ? PAC:30528249
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax DETOX1-PWY Glycine max pathologic  
Gmax DETOX1-PWY-1 Glycine max pathologic  
Gmax PWY-6854 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G192700 0.5kb upstream 0.5kb upstream 4237 true Chr11: 26591332-26595568 Glycine max
Glyma.11G192700 0.5kb upstream 0.5kb upstream 500 false Chr11: 26595069-26595568 Glycine max
Glyma.11G192700 0.5kb downstream 0.5kb downstream 4237 true Chr11: 26590832-26595068 Glycine max
Glyma.11G192700 0.5kb downstream 0.5kb downstream 500 false Chr11: 26590832-26591331 Glycine max
Glyma.11G192700 1.0kb upstream 1.0kb upstream 4737 true Chr11: 26591332-26596068 Glycine max
Glyma.11G192700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 26595069-26596068 Glycine max
Glyma.11G192700 1.0kb downstream 1.0kb downstream 4737 true Chr11: 26590332-26595068 Glycine max
Glyma.11G192700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 26590332-26591331 Glycine max
Glyma.11G192700 2.0kb upstream 2.0kb upstream 5737 true Chr11: 26591332-26597068 Glycine max
Glyma.11G192700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 26595069-26597068 Glycine max
Glyma.11G192700 2.0kb downstream 2.0kb downstream 5737 true Chr11: 26589332-26595068 Glycine max
Glyma.11G192700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 26589332-26591331 Glycine max
Glyma.11G192700 5.0kb upstream 5.0kb upstream 8737 true Chr11: 26591332-26600068 Glycine max
Glyma.11G192700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 26595069-26600068 Glycine max
Glyma.11G192700 5.0kb downstream 5.0kb downstream 8737 true Chr11: 26586332-26595068 Glycine max
Glyma.11G192700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 26586332-26591331 Glycine max
Glyma.11G192700 10.0kb upstream 10.0kb upstream 13737 true Chr11: 26591332-26605068 Glycine max
Glyma.11G192700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 26595069-26605068 Glycine max
Glyma.11G192700 10.0kb downstream 10.0kb downstream 13737 true Chr11: 26581332-26595068 Glycine max
Glyma.11G192700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 26581332-26591331 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299889 5265 Fabidae View MSA
124067425 5270 Rosid View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 97.0814 0.0 443.298 High  
cufflinks 98.6231 0.0 450.539 High  
cufflinks 20.2948 0.0 88.2629 High Low
cufflinks 70.0446 0.0 279.262 High  
cufflinks 63.7742 0.0 270.828 High  
cufflinks 32.473 0.0 135.434 High Low
cufflinks 122.174 0.0 598.588 High High
cufflinks 62.9567 0.0 266.264 High  
cufflinks 48.2636 0.0 198.091 High  
cufflinks 2.187        
cufflinks 0.203       Low
cufflinks 1.745        
cufflinks 1.52        
cufflinks 1.584        
cufflinks 0.496        
cufflinks 10.132     High High
cufflinks 0.581        
cufflinks 2.575        
cufflinks 2.871        
cufflinks 9.231     High High
cufflinks 0.324       Low
cufflinks 10.422     High High
cufflinks 8.752     High High
cufflinks 0.243       Low
cufflinks 12.453     High High
cufflinks 0.676        

0 Strain