Gene : Glyma.11G193300 G. max Wm82.a2.v1
Defline:  (1 of 4) PF07557 - Shugoshin C terminus (Shugoshin_C) Genomic Order:  1933
Name:  ? Glyma.11G193300 Secondary Identifier:  ? PAC:30530493
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G193300 0.5kb upstream 0.5kb upstream 3513 true Chr11: 26657743-26661255 Glycine max
Glyma.11G193300 0.5kb upstream 0.5kb upstream 500 false Chr11: 26660756-26661255 Glycine max
Glyma.11G193300 0.5kb downstream 0.5kb downstream 3513 true Chr11: 26657243-26660755 Glycine max
Glyma.11G193300 0.5kb downstream 0.5kb downstream 500 false Chr11: 26657243-26657742 Glycine max
Glyma.11G193300 1.0kb upstream 1.0kb upstream 4013 true Chr11: 26657743-26661755 Glycine max
Glyma.11G193300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 26660756-26661755 Glycine max
Glyma.11G193300 1.0kb downstream 1.0kb downstream 4013 true Chr11: 26656743-26660755 Glycine max
Glyma.11G193300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 26656743-26657742 Glycine max
Glyma.11G193300 2.0kb upstream 2.0kb upstream 5013 true Chr11: 26657743-26662755 Glycine max
Glyma.11G193300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 26660756-26662755 Glycine max
Glyma.11G193300 2.0kb downstream 2.0kb downstream 5013 true Chr11: 26655743-26660755 Glycine max
Glyma.11G193300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 26655743-26657742 Glycine max
Glyma.11G193300 5.0kb upstream 5.0kb upstream 8013 true Chr11: 26657743-26665755 Glycine max
Glyma.11G193300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 26660756-26665755 Glycine max
Glyma.11G193300 5.0kb downstream 5.0kb downstream 8013 true Chr11: 26652743-26660755 Glycine max
Glyma.11G193300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 26652743-26657742 Glycine max
Glyma.11G193300 10.0kb upstream 10.0kb upstream 13013 true Chr11: 26657743-26670755 Glycine max
Glyma.11G193300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 26660756-26670755 Glycine max
Glyma.11G193300 10.0kb downstream 10.0kb downstream 13013 true Chr11: 26647743-26660755 Glycine max
Glyma.11G193300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 26647743-26657742 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028020 5273 Angiosperm View MSA
122306201 5265 Fabidae View MSA
124074097 5270 Rosid View MSA
123746067 5271 Pentapetalae View MSA
122795330 5272 Eudicot View MSA
121349389 5274 Embryophyte View MSA
123381292 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105019 0.0 0.418019 Low Low
cufflinks 3.83078 0.0 11.7848   High
cufflinks 0.262156 0.0 1.00487   Low
cufflinks 1.07087 0.0 3.81217    
cufflinks 1.17073 0.0 4.1534    
cufflinks 0.985594 0.0 3.54207    
cufflinks 1.67444 0.0 5.76213    
cufflinks 1.98119 0.0 6.65454    
cufflinks 1.24985 0.0 4.40499    
cufflinks 1.156        
cufflinks 0.135       Low
cufflinks 0.598        
cufflinks 1.394        
cufflinks 1.178        
cufflinks 0.018     Low Low
cufflinks 2.761        
cufflinks 0.29        
cufflinks 0.801        
cufflinks 1.99        
cufflinks 2.785        
cufflinks 0.127       Low
cufflinks 3.079       High
cufflinks 3.782       High
cufflinks 0.12       Low
cufflinks 2.456        
cufflinks 0.288        

0 Strain