Gene : Glyma.11G182400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31852:SF7 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  1824
Name:  ? Glyma.11G182400 Secondary Identifier:  ? PAC:30530672
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G182400 0.5kb upstream 0.5kb upstream 4959 true Chr11: 24988421-24993379 Glycine max
Glyma.11G182400 0.5kb upstream 0.5kb upstream 500 false Chr11: 24988421-24988920 Glycine max
Glyma.11G182400 0.5kb downstream 0.5kb downstream 4959 true Chr11: 24988921-24993879 Glycine max
Glyma.11G182400 0.5kb downstream 0.5kb downstream 500 false Chr11: 24993380-24993879 Glycine max
Glyma.11G182400 1.0kb upstream 1.0kb upstream 5459 true Chr11: 24987921-24993379 Glycine max
Glyma.11G182400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24987921-24988920 Glycine max
Glyma.11G182400 1.0kb downstream 1.0kb downstream 5459 true Chr11: 24988921-24994379 Glycine max
Glyma.11G182400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24993380-24994379 Glycine max
Glyma.11G182400 2.0kb upstream 2.0kb upstream 6459 true Chr11: 24986921-24993379 Glycine max
Glyma.11G182400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24986921-24988920 Glycine max
Glyma.11G182400 2.0kb downstream 2.0kb downstream 6459 true Chr11: 24988921-24995379 Glycine max
Glyma.11G182400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24993380-24995379 Glycine max
Glyma.11G182400 5.0kb upstream 5.0kb upstream 9459 true Chr11: 24983921-24993379 Glycine max
Glyma.11G182400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24983921-24988920 Glycine max
Glyma.11G182400 5.0kb downstream 5.0kb downstream 9459 true Chr11: 24988921-24998379 Glycine max
Glyma.11G182400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24993380-24998379 Glycine max
Glyma.11G182400 10.0kb upstream 10.0kb upstream 14459 true Chr11: 24978921-24993379 Glycine max
Glyma.11G182400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24978921-24988920 Glycine max
Glyma.11G182400 10.0kb downstream 10.0kb downstream 14459 true Chr11: 24988921-25003379 Glycine max
Glyma.11G182400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24993380-25003379 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305148 5265 Fabidae View MSA
124065913 5270 Rosid View MSA
123751037 5271 Pentapetalae View MSA
122791768 5272 Eudicot View MSA
122047414 5273 Angiosperm View MSA
121346777 5274 Embryophyte View MSA
123380442 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0319 0.0 35.7826   High
cufflinks 4.66312 0.0 19.8381    
cufflinks 3.97743 0.0 17.8564    
cufflinks 2.01893 0.0 11.279    
cufflinks 2.23104 0.0 12.1442    
cufflinks 2.03131 0.0 11.3796    
cufflinks 1.37732 0.0 5.5594   Low
cufflinks 1.81035 0.0 8.88024    
cufflinks 1.92753 0.0 9.24223    
cufflinks 0.144        
cufflinks 0.087        
cufflinks 0.489        
cufflinks 0.105        
cufflinks 0.08        
cufflinks 0.154        
cufflinks 1.265       High
cufflinks 0.025     Low Low
cufflinks 0.48        
cufflinks 0.482        
cufflinks 1.705       High
cufflinks 0.103        
cufflinks 1.475       High
cufflinks 1.198       High
cufflinks 0.127        
cufflinks 1.557       High
cufflinks 0.073        

0 Strain