Gene : Glyma.11G182500 G. max Wm82.a2.v1
Defline:  (1 of 24) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  1825
Name:  ? Glyma.11G182500 Secondary Identifier:  ? PAC:30529096
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G182500 0.5kb upstream 0.5kb upstream 1229 true Chr11: 24993900-24995128 Glycine max
Glyma.11G182500 0.5kb upstream 0.5kb upstream 500 false Chr11: 24994629-24995128 Glycine max
Glyma.11G182500 0.5kb downstream 0.5kb downstream 1229 true Chr11: 24993400-24994628 Glycine max
Glyma.11G182500 0.5kb downstream 0.5kb downstream 500 false Chr11: 24993400-24993899 Glycine max
Glyma.11G182500 1.0kb upstream 1.0kb upstream 1729 true Chr11: 24993900-24995628 Glycine max
Glyma.11G182500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24994629-24995628 Glycine max
Glyma.11G182500 1.0kb downstream 1.0kb downstream 1729 true Chr11: 24992900-24994628 Glycine max
Glyma.11G182500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24992900-24993899 Glycine max
Glyma.11G182500 2.0kb upstream 2.0kb upstream 2729 true Chr11: 24993900-24996628 Glycine max
Glyma.11G182500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24994629-24996628 Glycine max
Glyma.11G182500 2.0kb downstream 2.0kb downstream 2729 true Chr11: 24991900-24994628 Glycine max
Glyma.11G182500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24991900-24993899 Glycine max
Glyma.11G182500 5.0kb upstream 5.0kb upstream 5729 true Chr11: 24993900-24999628 Glycine max
Glyma.11G182500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24994629-24999628 Glycine max
Glyma.11G182500 5.0kb downstream 5.0kb downstream 5729 true Chr11: 24988900-24994628 Glycine max
Glyma.11G182500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24988900-24993899 Glycine max
Glyma.11G182500 10.0kb upstream 10.0kb upstream 10729 true Chr11: 24993900-25004628 Glycine max
Glyma.11G182500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24994629-25004628 Glycine max
Glyma.11G182500 10.0kb downstream 10.0kb downstream 10729 true Chr11: 24983900-24994628 Glycine max
Glyma.11G182500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24983900-24993899 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250616 5265 Fabidae View MSA
124069598 5270 Rosid View MSA
123752468 5271 Pentapetalae View MSA
122797002 5272 Eudicot View MSA
122048900 5273 Angiosperm View MSA
121311160 5274 Embryophyte View MSA
123348494 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.15521 0.0 24.9832   High
cufflinks 0.0876957 0.0 0.363657 Low  
cufflinks 0.095045 0.0 0.39211 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.103438 0.0 0.425045 Low  
cufflinks 0.057929 0.0 0.248256 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.111        
cufflinks 0.317        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.541        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low Low
cufflinks 0.052     Low Low
cufflinks 3.928       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.957       High
cufflinks 1.279        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.561        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain