Gene : Glyma.11G182800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13803//PTHR13803:SF10 - SEC24-RELATED PROTEIN Genomic Order:  1828
Name:  ? Glyma.11G182800 Secondary Identifier:  ? PAC:30528975
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G182800 0.5kb upstream 0.5kb upstream 8111 true Chr11: 25044439-25052549 Glycine max
Glyma.11G182800 0.5kb upstream 0.5kb upstream 500 false Chr11: 25044439-25044938 Glycine max
Glyma.11G182800 0.5kb downstream 0.5kb downstream 8111 true Chr11: 25044939-25053049 Glycine max
Glyma.11G182800 0.5kb downstream 0.5kb downstream 500 false Chr11: 25052550-25053049 Glycine max
Glyma.11G182800 1.0kb upstream 1.0kb upstream 8611 true Chr11: 25043939-25052549 Glycine max
Glyma.11G182800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25043939-25044938 Glycine max
Glyma.11G182800 1.0kb downstream 1.0kb downstream 8611 true Chr11: 25044939-25053549 Glycine max
Glyma.11G182800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 25052550-25053549 Glycine max
Glyma.11G182800 2.0kb upstream 2.0kb upstream 9611 true Chr11: 25042939-25052549 Glycine max
Glyma.11G182800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25042939-25044938 Glycine max
Glyma.11G182800 2.0kb downstream 2.0kb downstream 9611 true Chr11: 25044939-25054549 Glycine max
Glyma.11G182800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 25052550-25054549 Glycine max
Glyma.11G182800 5.0kb upstream 5.0kb upstream 12611 true Chr11: 25039939-25052549 Glycine max
Glyma.11G182800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25039939-25044938 Glycine max
Glyma.11G182800 5.0kb downstream 5.0kb downstream 12611 true Chr11: 25044939-25057549 Glycine max
Glyma.11G182800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 25052550-25057549 Glycine max
Glyma.11G182800 10.0kb upstream 10.0kb upstream 17611 true Chr11: 25034939-25052549 Glycine max
Glyma.11G182800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25034939-25044938 Glycine max
Glyma.11G182800 10.0kb downstream 10.0kb downstream 17611 true Chr11: 25044939-25062549 Glycine max
Glyma.11G182800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 25052550-25062549 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301861 5265 Fabidae View MSA
124064119 5270 Rosid View MSA
123740907 5271 Pentapetalae View MSA
122789020 5272 Eudicot View MSA
122042222 5273 Angiosperm View MSA
121345983 5274 Embryophyte View MSA
123428151 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.74697 0.0 18.2421   Low
cufflinks 8.31319 0.0 29.4081    
cufflinks 6.1115 0.0 21.9828   Low
cufflinks 10.6593 0.0 36.8924    
cufflinks 12.6075 0.0 43.599   High
cufflinks 9.78116 0.0 34.2952    
cufflinks 12.5695 0.0 37.1924   High
cufflinks 9.11857 0.0 31.6319    
cufflinks 9.88127 0.0 35.084    
cufflinks 1.774        
cufflinks 0.359       Low
cufflinks 1.445        
cufflinks 2.601       High
cufflinks 3.055       High
cufflinks 0.687        
cufflinks 1.416        
cufflinks 0.96        
cufflinks 1.981        
cufflinks 1.949        
cufflinks 1.396        
cufflinks 0.565       Low
cufflinks 1.5        
cufflinks 1.641        
cufflinks 0.521       Low
cufflinks 1.468        
cufflinks 0.842        

0 Strain