Gene : Glyma.11G183100 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG0870 - DNA polymerase epsilon, subunit D Genomic Order:  1831
Name:  ? Glyma.11G183100 Secondary Identifier:  ? PAC:30529312
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G183100 0.5kb upstream 0.5kb upstream 2406 true Chr11: 25067741-25070146 Glycine max
Glyma.11G183100 0.5kb upstream 0.5kb upstream 500 false Chr11: 25069647-25070146 Glycine max
Glyma.11G183100 0.5kb downstream 0.5kb downstream 2406 true Chr11: 25067241-25069646 Glycine max
Glyma.11G183100 0.5kb downstream 0.5kb downstream 500 false Chr11: 25067241-25067740 Glycine max
Glyma.11G183100 1.0kb upstream 1.0kb upstream 2906 true Chr11: 25067741-25070646 Glycine max
Glyma.11G183100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25069647-25070646 Glycine max
Glyma.11G183100 1.0kb downstream 1.0kb downstream 2906 true Chr11: 25066741-25069646 Glycine max
Glyma.11G183100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 25066741-25067740 Glycine max
Glyma.11G183100 2.0kb upstream 2.0kb upstream 3906 true Chr11: 25067741-25071646 Glycine max
Glyma.11G183100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25069647-25071646 Glycine max
Glyma.11G183100 2.0kb downstream 2.0kb downstream 3906 true Chr11: 25065741-25069646 Glycine max
Glyma.11G183100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 25065741-25067740 Glycine max
Glyma.11G183100 5.0kb upstream 5.0kb upstream 6906 true Chr11: 25067741-25074646 Glycine max
Glyma.11G183100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25069647-25074646 Glycine max
Glyma.11G183100 5.0kb downstream 5.0kb downstream 6906 true Chr11: 25062741-25069646 Glycine max
Glyma.11G183100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 25062741-25067740 Glycine max
Glyma.11G183100 10.0kb upstream 10.0kb upstream 11906 true Chr11: 25067741-25079646 Glycine max
Glyma.11G183100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25069647-25079646 Glycine max
Glyma.11G183100 10.0kb downstream 10.0kb downstream 11906 true Chr11: 25057741-25069646 Glycine max
Glyma.11G183100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 25057741-25067740 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299729 5265 Fabidae View MSA
124065449 5270 Rosid View MSA
123742361 5271 Pentapetalae View MSA
122794947 5272 Eudicot View MSA
122048157 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121348277 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.3915 0.0 24.9209   Low
cufflinks 34.1159 0.0 91.0341 High High
cufflinks 11.1117 0.0 31.6881   Low
cufflinks 20.7237 0.0 56.1487 High  
cufflinks 27.6279 0.0 73.9959 High  
cufflinks 26.1621 0.0 70.2002 High  
cufflinks 27.7762 0.0 74.4353 High  
cufflinks 22.4126 0.0 60.4768 High  
cufflinks 26.1645 0.0 70.173 High  
cufflinks 9.993     High  
cufflinks 2.203       Low
cufflinks 8.152     High  
cufflinks 18.913     High High
cufflinks 23.72     High High
cufflinks 2.08       Low
cufflinks 7.763     High  
cufflinks 5.072        
cufflinks 8.852     High  
cufflinks 15.418     High High
cufflinks 4.585        
cufflinks 3.171       Low
cufflinks 5.76        
cufflinks 9.813     High  
cufflinks 3.299        
cufflinks 6.08        
cufflinks 4.638        

0 Strain