Gene : Glyma.11G185500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11353:SF23 - T-COMPLEX PROTEIN 1 SUBUNIT BETA Genomic Order:  1855
Name:  ? Glyma.11G185500 Secondary Identifier:  ? PAC:30531096
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G185500 0.5kb upstream 0.5kb upstream 8482 true Chr11: 25416977-25425458 Glycine max
Glyma.11G185500 0.5kb upstream 0.5kb upstream 500 false Chr11: 25424959-25425458 Glycine max
Glyma.11G185500 0.5kb downstream 0.5kb downstream 8482 true Chr11: 25416477-25424958 Glycine max
Glyma.11G185500 0.5kb downstream 0.5kb downstream 500 false Chr11: 25416477-25416976 Glycine max
Glyma.11G185500 1.0kb upstream 1.0kb upstream 8982 true Chr11: 25416977-25425958 Glycine max
Glyma.11G185500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25424959-25425958 Glycine max
Glyma.11G185500 1.0kb downstream 1.0kb downstream 8982 true Chr11: 25415977-25424958 Glycine max
Glyma.11G185500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 25415977-25416976 Glycine max
Glyma.11G185500 2.0kb upstream 2.0kb upstream 9982 true Chr11: 25416977-25426958 Glycine max
Glyma.11G185500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25424959-25426958 Glycine max
Glyma.11G185500 2.0kb downstream 2.0kb downstream 9982 true Chr11: 25414977-25424958 Glycine max
Glyma.11G185500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 25414977-25416976 Glycine max
Glyma.11G185500 5.0kb upstream 5.0kb upstream 12982 true Chr11: 25416977-25429958 Glycine max
Glyma.11G185500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25424959-25429958 Glycine max
Glyma.11G185500 5.0kb downstream 5.0kb downstream 12982 true Chr11: 25411977-25424958 Glycine max
Glyma.11G185500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 25411977-25416976 Glycine max
Glyma.11G185500 10.0kb upstream 10.0kb upstream 17982 true Chr11: 25416977-25434958 Glycine max
Glyma.11G185500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25424959-25434958 Glycine max
Glyma.11G185500 10.0kb downstream 10.0kb downstream 17982 true Chr11: 25406977-25424958 Glycine max
Glyma.11G185500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 25406977-25416976 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315025 5265 Fabidae View MSA
124064073 5270 Rosid View MSA
123747286 5271 Pentapetalae View MSA
122790745 5272 Eudicot View MSA
122042218 5273 Angiosperm View MSA
121346616 5274 Embryophyte View MSA
123426772 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.831 0.0 55.9131   Low
cufflinks 45.9299 0.0 131.4 High  
cufflinks 13.7776 0.0 36.7596   Low
cufflinks 39.0779 0.0 109.872 High  
cufflinks 60.0054 0.0 178.014 High High
cufflinks 38.8564 0.0 109.082 High  
cufflinks 38.5056 0.0 107.789 High  
cufflinks 43.384 0.0 123.447 High  
cufflinks 38.8329 0.0 108.998 High  
cufflinks 11.998     High  
cufflinks 2.453       Low
cufflinks 6.407        
cufflinks 19.907     High High
cufflinks 28.471     High High
cufflinks 3.341       Low
cufflinks 6.756        
cufflinks 4.724        
cufflinks 6.902        
cufflinks 14.006     High High
cufflinks 4.712        
cufflinks 4.491        
cufflinks 5.336        
cufflinks 8.065     High  
cufflinks 3.14       Low
cufflinks 5.994        
cufflinks 5.758        

0 Strain