Gene : Glyma.11G186100 G. max Wm82.a2.v1
Defline:  (1 of 20) PTHR11945:SF183 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  1861
Name:  ? Glyma.11G186100 Secondary Identifier:  ? PAC:30528554
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G186100 0.5kb upstream 0.5kb upstream 1166 true Chr11: 25519423-25520588 Glycine max
Glyma.11G186100 0.5kb upstream 0.5kb upstream 500 false Chr11: 25520089-25520588 Glycine max
Glyma.11G186100 0.5kb downstream 0.5kb downstream 1166 true Chr11: 25518923-25520088 Glycine max
Glyma.11G186100 0.5kb downstream 0.5kb downstream 500 false Chr11: 25518923-25519422 Glycine max
Glyma.11G186100 1.0kb upstream 1.0kb upstream 1666 true Chr11: 25519423-25521088 Glycine max
Glyma.11G186100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25520089-25521088 Glycine max
Glyma.11G186100 1.0kb downstream 1.0kb downstream 1666 true Chr11: 25518423-25520088 Glycine max
Glyma.11G186100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 25518423-25519422 Glycine max
Glyma.11G186100 2.0kb upstream 2.0kb upstream 2666 true Chr11: 25519423-25522088 Glycine max
Glyma.11G186100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25520089-25522088 Glycine max
Glyma.11G186100 2.0kb downstream 2.0kb downstream 2666 true Chr11: 25517423-25520088 Glycine max
Glyma.11G186100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 25517423-25519422 Glycine max
Glyma.11G186100 5.0kb upstream 5.0kb upstream 5666 true Chr11: 25519423-25525088 Glycine max
Glyma.11G186100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25520089-25525088 Glycine max
Glyma.11G186100 5.0kb downstream 5.0kb downstream 5666 true Chr11: 25514423-25520088 Glycine max
Glyma.11G186100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 25514423-25519422 Glycine max
Glyma.11G186100 10.0kb upstream 10.0kb upstream 10666 true Chr11: 25519423-25530088 Glycine max
Glyma.11G186100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25520089-25530088 Glycine max
Glyma.11G186100 10.0kb downstream 10.0kb downstream 10666 true Chr11: 25509423-25520088 Glycine max
Glyma.11G186100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 25509423-25519422 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656288 5273 Angiosperm View MSA
122298017 5265 Fabidae View MSA
124036272 5270 Rosid View MSA
123609642 5271 Pentapetalae View MSA
122644286 5272 Eudicot View MSA
120928370 5274 Embryophyte View MSA
122968979 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.102328 0.0 0.422156 Low  
cufflinks 0.361397 0.0 1.4133   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0548932 0.0 0.23642 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.171        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.201        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.199        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.252        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.476       High

0 Strain