Gene : Glyma.11G186600 G. max Wm82.a2.v1
Defline:  (1 of 31) PTHR21717 - TELOMERIC REPEAT BINDING PROTEIN Genomic Order:  1866
Name:  ? Glyma.11G186600 Secondary Identifier:  ? PAC:30529664
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G186600 0.5kb upstream 0.5kb upstream 5765 true Chr11: 25635560-25641324 Glycine max
Glyma.11G186600 0.5kb upstream 0.5kb upstream 500 false Chr11: 25635560-25636059 Glycine max
Glyma.11G186600 0.5kb downstream 0.5kb downstream 5765 true Chr11: 25636060-25641824 Glycine max
Glyma.11G186600 0.5kb downstream 0.5kb downstream 500 false Chr11: 25641325-25641824 Glycine max
Glyma.11G186600 1.0kb upstream 1.0kb upstream 6265 true Chr11: 25635060-25641324 Glycine max
Glyma.11G186600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25635060-25636059 Glycine max
Glyma.11G186600 1.0kb downstream 1.0kb downstream 6265 true Chr11: 25636060-25642324 Glycine max
Glyma.11G186600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 25641325-25642324 Glycine max
Glyma.11G186600 2.0kb upstream 2.0kb upstream 7265 true Chr11: 25634060-25641324 Glycine max
Glyma.11G186600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25634060-25636059 Glycine max
Glyma.11G186600 2.0kb downstream 2.0kb downstream 7265 true Chr11: 25636060-25643324 Glycine max
Glyma.11G186600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 25641325-25643324 Glycine max
Glyma.11G186600 5.0kb upstream 5.0kb upstream 10265 true Chr11: 25631060-25641324 Glycine max
Glyma.11G186600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25631060-25636059 Glycine max
Glyma.11G186600 5.0kb downstream 5.0kb downstream 10265 true Chr11: 25636060-25646324 Glycine max
Glyma.11G186600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 25641325-25646324 Glycine max
Glyma.11G186600 10.0kb upstream 10.0kb upstream 15265 true Chr11: 25626060-25641324 Glycine max
Glyma.11G186600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25626060-25636059 Glycine max
Glyma.11G186600 10.0kb downstream 10.0kb downstream 15265 true Chr11: 25636060-25651324 Glycine max
Glyma.11G186600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 25641325-25651324 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314491 5265 Fabidae View MSA
124067542 5270 Rosid View MSA
123751765 5271 Pentapetalae View MSA
122796417 5272 Eudicot View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.09497 0.0 24.2468    
cufflinks 5.12425 0.0 22.2881    
cufflinks 5.349 0.0 25.9125   High
cufflinks 3.52092 0.0 16.7885    
cufflinks 4.85363 0.0 28.2776    
cufflinks 2.67193 0.0 15.922   Low
cufflinks 4.02663 0.0 18.4658    
cufflinks 2.87744 0.0 16.7633   Low
cufflinks 4.32546 0.0 19.8317    
cufflinks 0.26       Low
cufflinks 0.308        
cufflinks 0.727       High
cufflinks 0.575        
cufflinks 0.731       High
cufflinks 0.249       Low
cufflinks 0.432        
cufflinks 0.199       Low
cufflinks 0.499        
cufflinks 0.86       High
cufflinks 0.333        
cufflinks 0.364        
cufflinks 0.503        
cufflinks 0.708       High
cufflinks 0.463        
cufflinks 0.435        
cufflinks 0.329        

0 Strain