Gene : Glyma.11G188000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21470//PTHR21470:SF4 - NTKL-BINDING PROTEIN 1 Genomic Order:  1880
Name:  ? Glyma.11G188000 Secondary Identifier:  ? PAC:30529181
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G188000 0.5kb upstream 0.5kb upstream 3084 true Chr11: 25973197-25976280 Glycine max
Glyma.11G188000 0.5kb upstream 0.5kb upstream 500 false Chr11: 25973197-25973696 Glycine max
Glyma.11G188000 0.5kb downstream 0.5kb downstream 3084 true Chr11: 25973697-25976780 Glycine max
Glyma.11G188000 0.5kb downstream 0.5kb downstream 500 false Chr11: 25976281-25976780 Glycine max
Glyma.11G188000 1.0kb upstream 1.0kb upstream 3584 true Chr11: 25972697-25976280 Glycine max
Glyma.11G188000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25972697-25973696 Glycine max
Glyma.11G188000 1.0kb downstream 1.0kb downstream 3584 true Chr11: 25973697-25977280 Glycine max
Glyma.11G188000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 25976281-25977280 Glycine max
Glyma.11G188000 2.0kb upstream 2.0kb upstream 4584 true Chr11: 25971697-25976280 Glycine max
Glyma.11G188000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25971697-25973696 Glycine max
Glyma.11G188000 2.0kb downstream 2.0kb downstream 4584 true Chr11: 25973697-25978280 Glycine max
Glyma.11G188000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 25976281-25978280 Glycine max
Glyma.11G188000 5.0kb upstream 5.0kb upstream 7584 true Chr11: 25968697-25976280 Glycine max
Glyma.11G188000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25968697-25973696 Glycine max
Glyma.11G188000 5.0kb downstream 5.0kb downstream 7584 true Chr11: 25973697-25981280 Glycine max
Glyma.11G188000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 25976281-25981280 Glycine max
Glyma.11G188000 10.0kb upstream 10.0kb upstream 12584 true Chr11: 25963697-25976280 Glycine max
Glyma.11G188000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25963697-25973696 Glycine max
Glyma.11G188000 10.0kb downstream 10.0kb downstream 12584 true Chr11: 25973697-25986280 Glycine max
Glyma.11G188000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 25976281-25986280 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308285 5265 Fabidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.167199 0.0 0.656324 Low Low
cufflinks 4.88106 0.0 14.7025    
cufflinks 0.373963 0.0 1.41613   Low
cufflinks 5.7924 0.0 16.9719    
cufflinks 2.52127 0.0 8.34483    
cufflinks 2.74972 0.0 9.01105    
cufflinks 0.271548 0.0 1.0448   Low
cufflinks 11.876 0.0 32.3983   High
cufflinks 4.38497 0.0 13.4225    
cufflinks 2.917       High
cufflinks 0.407        
cufflinks 0.396        
cufflinks 3.474       High
cufflinks 0.735        
cufflinks 0.014     Low Low
cufflinks 1.208        
cufflinks 1.121        
cufflinks 1.237        
cufflinks 2.326        
cufflinks 0.875        
cufflinks 0.522        
cufflinks 0.856        
cufflinks 0.5        
cufflinks 0.295        
cufflinks 1.007        
cufflinks 0.988        

0 Strain