Gene : Glyma.11G188100 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.5.1.75 - tRNA dimethylallyltransferase / tRNA prenyltransferase Genomic Order:  1881
Name:  ? Glyma.11G188100 Secondary Identifier:  ? PAC:30529660
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2781 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G188100 0.5kb upstream 0.5kb upstream 5041 true Chr11: 25981023-25986063 Glycine max
Glyma.11G188100 0.5kb upstream 0.5kb upstream 500 false Chr11: 25981023-25981522 Glycine max
Glyma.11G188100 0.5kb downstream 0.5kb downstream 5041 true Chr11: 25981523-25986563 Glycine max
Glyma.11G188100 0.5kb downstream 0.5kb downstream 500 false Chr11: 25986064-25986563 Glycine max
Glyma.11G188100 1.0kb upstream 1.0kb upstream 5541 true Chr11: 25980523-25986063 Glycine max
Glyma.11G188100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25980523-25981522 Glycine max
Glyma.11G188100 1.0kb downstream 1.0kb downstream 5541 true Chr11: 25981523-25987063 Glycine max
Glyma.11G188100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 25986064-25987063 Glycine max
Glyma.11G188100 2.0kb upstream 2.0kb upstream 6541 true Chr11: 25979523-25986063 Glycine max
Glyma.11G188100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25979523-25981522 Glycine max
Glyma.11G188100 2.0kb downstream 2.0kb downstream 6541 true Chr11: 25981523-25988063 Glycine max
Glyma.11G188100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 25986064-25988063 Glycine max
Glyma.11G188100 5.0kb upstream 5.0kb upstream 9541 true Chr11: 25976523-25986063 Glycine max
Glyma.11G188100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25976523-25981522 Glycine max
Glyma.11G188100 5.0kb downstream 5.0kb downstream 9541 true Chr11: 25981523-25991063 Glycine max
Glyma.11G188100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 25986064-25991063 Glycine max
Glyma.11G188100 10.0kb upstream 10.0kb upstream 14541 true Chr11: 25971523-25986063 Glycine max
Glyma.11G188100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25971523-25981522 Glycine max
Glyma.11G188100 10.0kb downstream 10.0kb downstream 14541 true Chr11: 25981523-25996063 Glycine max
Glyma.11G188100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 25986064-25996063 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304265 5265 Fabidae View MSA
124061128 5270 Rosid View MSA
123740850 5271 Pentapetalae View MSA
122786758 5272 Eudicot View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.24261 0.0 10.0792    
cufflinks 3.19209 0.0 9.95243    
cufflinks 3.46213 0.0 10.6084    
cufflinks 2.64925 0.0 8.47564    
cufflinks 2.86634 0.0 9.06478    
cufflinks 1.89995 0.0 6.35071   Low
cufflinks 3.50797 0.0 10.8044   High
cufflinks 2.83084 0.0 8.97143    
cufflinks 2.71648 0.0 8.65918    
cufflinks 0.966        
cufflinks 0.814        
cufflinks 1.54        
cufflinks 1.421        
cufflinks 2.089       High
cufflinks 2.289       High
cufflinks 1.032        
cufflinks 0.748       Low
cufflinks 1.257        
cufflinks 1.513        
cufflinks 0.974        
cufflinks 0.695       Low
cufflinks 0.99        
cufflinks 1.197        
cufflinks 0.648       Low
cufflinks 1.019        
cufflinks 0.738       Low

0 Strain