Gene : Glyma.11G188900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10792:SF8 - RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED Genomic Order:  1889
Name:  ? Glyma.11G188900 Secondary Identifier:  ? PAC:30530336
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G188900 0.5kb upstream 0.5kb upstream 3563 true Chr11: 26055639-26059201 Glycine max
Glyma.11G188900 0.5kb upstream 0.5kb upstream 500 false Chr11: 26058702-26059201 Glycine max
Glyma.11G188900 0.5kb downstream 0.5kb downstream 3563 true Chr11: 26055139-26058701 Glycine max
Glyma.11G188900 0.5kb downstream 0.5kb downstream 500 false Chr11: 26055139-26055638 Glycine max
Glyma.11G188900 1.0kb upstream 1.0kb upstream 4063 true Chr11: 26055639-26059701 Glycine max
Glyma.11G188900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 26058702-26059701 Glycine max
Glyma.11G188900 1.0kb downstream 1.0kb downstream 4063 true Chr11: 26054639-26058701 Glycine max
Glyma.11G188900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 26054639-26055638 Glycine max
Glyma.11G188900 2.0kb upstream 2.0kb upstream 5063 true Chr11: 26055639-26060701 Glycine max
Glyma.11G188900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 26058702-26060701 Glycine max
Glyma.11G188900 2.0kb downstream 2.0kb downstream 5063 true Chr11: 26053639-26058701 Glycine max
Glyma.11G188900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 26053639-26055638 Glycine max
Glyma.11G188900 5.0kb upstream 5.0kb upstream 8063 true Chr11: 26055639-26063701 Glycine max
Glyma.11G188900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 26058702-26063701 Glycine max
Glyma.11G188900 5.0kb downstream 5.0kb downstream 8063 true Chr11: 26050639-26058701 Glycine max
Glyma.11G188900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 26050639-26055638 Glycine max
Glyma.11G188900 10.0kb upstream 10.0kb upstream 13063 true Chr11: 26055639-26068701 Glycine max
Glyma.11G188900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 26058702-26068701 Glycine max
Glyma.11G188900 10.0kb downstream 10.0kb downstream 13063 true Chr11: 26045639-26058701 Glycine max
Glyma.11G188900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 26045639-26055638 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250115 5265 Fabidae View MSA
124060903 5270 Rosid View MSA
123737225 5271 Pentapetalae View MSA
122786716 5272 Eudicot View MSA
122045898 5273 Angiosperm View MSA
121346492 5274 Embryophyte View MSA
123427829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.08871 0.0 29.2724    
cufflinks 6.26499 0.0 26.8368    
cufflinks 4.52687 0.0 14.8417   Low
cufflinks 9.47815 0.0 41.9095    
cufflinks 8.10241 0.0 36.6169    
cufflinks 5.11672 0.0 16.1736   Low
cufflinks 14.8094 0.0 56.4091   High
cufflinks 5.94641 0.0 17.9751    
cufflinks 7.74526 0.0 28.0891    
cufflinks 1.47        
cufflinks 0.895       Low
cufflinks 1.808        
cufflinks 2.138       High
cufflinks 3.218       High
cufflinks 0.978        
cufflinks 1.122        
cufflinks 1.103        
cufflinks 1.902       High
cufflinks 1.538        
cufflinks 1.146        
cufflinks 1.164        
cufflinks 1.162        
cufflinks 1.401        
cufflinks 1.078        
cufflinks 1.092        
cufflinks 1.127        

0 Strain