Gene : Glyma.11G173800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23244:SF249 - MANNOSE-BINDING LECTIN SUPERFAMILY PROTEIN Genomic Order:  1738
Name:  ? Glyma.11G173800 Secondary Identifier:  ? PAC:30530790
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G173800 0.5kb upstream 0.5kb upstream 4984 true Chr11: 18905184-18910167 Glycine max
Glyma.11G173800 0.5kb upstream 0.5kb upstream 500 false Chr11: 18909668-18910167 Glycine max
Glyma.11G173800 0.5kb downstream 0.5kb downstream 4984 true Chr11: 18904684-18909667 Glycine max
Glyma.11G173800 0.5kb downstream 0.5kb downstream 500 false Chr11: 18904684-18905183 Glycine max
Glyma.11G173800 1.0kb upstream 1.0kb upstream 5484 true Chr11: 18905184-18910667 Glycine max
Glyma.11G173800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 18909668-18910667 Glycine max
Glyma.11G173800 1.0kb downstream 1.0kb downstream 5484 true Chr11: 18904184-18909667 Glycine max
Glyma.11G173800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 18904184-18905183 Glycine max
Glyma.11G173800 2.0kb upstream 2.0kb upstream 6484 true Chr11: 18905184-18911667 Glycine max
Glyma.11G173800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 18909668-18911667 Glycine max
Glyma.11G173800 2.0kb downstream 2.0kb downstream 6484 true Chr11: 18903184-18909667 Glycine max
Glyma.11G173800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 18903184-18905183 Glycine max
Glyma.11G173800 5.0kb upstream 5.0kb upstream 9484 true Chr11: 18905184-18914667 Glycine max
Glyma.11G173800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 18909668-18914667 Glycine max
Glyma.11G173800 5.0kb downstream 5.0kb downstream 9484 true Chr11: 18900184-18909667 Glycine max
Glyma.11G173800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 18900184-18905183 Glycine max
Glyma.11G173800 10.0kb upstream 10.0kb upstream 14484 true Chr11: 18905184-18919667 Glycine max
Glyma.11G173800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18909668-18919667 Glycine max
Glyma.11G173800 10.0kb downstream 10.0kb downstream 14484 true Chr11: 18895184-18909667 Glycine max
Glyma.11G173800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 18895184-18905183 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310939 5265 Fabidae View MSA
124064423 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.405847 0.0 1.49549    
cufflinks 0.00906968 0.0 0.0411312 Low Low
cufflinks 0.20375 0.0 0.773657 Low  
cufflinks 0.795574 0.0 2.80113    
cufflinks 0.148295 0.0 0.572838 Low  
cufflinks 0.176187 0.0 0.674935 Low  
cufflinks 1.18008 0.0 4.0093    
cufflinks 1.51335 0.0 4.97657   High
cufflinks 0.196682 0.0 0.749545 Low  
cufflinks 0.504       High
cufflinks 0.042     Low  
cufflinks 0.303       High
cufflinks 0.096        
cufflinks 0.038     Low  
cufflinks 0.013     Low  
cufflinks 0.024     Low  
cufflinks 0.957       High
cufflinks 0.346       High
cufflinks 0.003     Low Low
cufflinks 0.028     Low  
cufflinks 0.087        
cufflinks 0.014     Low  
cufflinks 0.012     Low  
cufflinks 0.056     Low  
cufflinks 0.013     Low  
cufflinks 0.131        

0 Strain