Gene : Glyma.11G174100 G. max Wm82.a2.v1
Defline:  (1 of 12) PF11960 - Domain of unknown function (DUF3474) (DUF3474) Genomic Order:  1741
Name:  ? Glyma.11G174100 Secondary Identifier:  ? PAC:30530632
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G174100 0.5kb upstream 0.5kb upstream 3871 true Chr11: 19009081-19012951 Glycine max
Glyma.11G174100 0.5kb upstream 0.5kb upstream 500 false Chr11: 19009081-19009580 Glycine max
Glyma.11G174100 0.5kb downstream 0.5kb downstream 3871 true Chr11: 19009581-19013451 Glycine max
Glyma.11G174100 0.5kb downstream 0.5kb downstream 500 false Chr11: 19012952-19013451 Glycine max
Glyma.11G174100 1.0kb upstream 1.0kb upstream 4371 true Chr11: 19008581-19012951 Glycine max
Glyma.11G174100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 19008581-19009580 Glycine max
Glyma.11G174100 1.0kb downstream 1.0kb downstream 4371 true Chr11: 19009581-19013951 Glycine max
Glyma.11G174100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 19012952-19013951 Glycine max
Glyma.11G174100 2.0kb upstream 2.0kb upstream 5371 true Chr11: 19007581-19012951 Glycine max
Glyma.11G174100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 19007581-19009580 Glycine max
Glyma.11G174100 2.0kb downstream 2.0kb downstream 5371 true Chr11: 19009581-19014951 Glycine max
Glyma.11G174100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 19012952-19014951 Glycine max
Glyma.11G174100 5.0kb upstream 5.0kb upstream 8371 true Chr11: 19004581-19012951 Glycine max
Glyma.11G174100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 19004581-19009580 Glycine max
Glyma.11G174100 5.0kb downstream 5.0kb downstream 8371 true Chr11: 19009581-19017951 Glycine max
Glyma.11G174100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 19012952-19017951 Glycine max
Glyma.11G174100 10.0kb upstream 10.0kb upstream 13371 true Chr11: 18999581-19012951 Glycine max
Glyma.11G174100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 18999581-19009580 Glycine max
Glyma.11G174100 10.0kb downstream 10.0kb downstream 13371 true Chr11: 19009581-19022951 Glycine max
Glyma.11G174100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 19012952-19022951 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313577 5265 Fabidae View MSA
124072004 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0954608 0.0 0.38216 Low Low
cufflinks 3.87525 0.0 12.0188    
cufflinks 1.45681 0.0 5.0777    
cufflinks 1.78431 0.0 6.12235    
cufflinks 24.4722 0.0 65.2958 High High
cufflinks 5.87917 0.0 17.2107    
cufflinks 5.22516 0.0 15.5554    
cufflinks 1.88449 0.0 6.40933    
cufflinks 9.16332 0.0 25.4809    
cufflinks 7.007       High
cufflinks 0.098       Low
cufflinks 1.737        
cufflinks 13.218     High High
cufflinks 22.943     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.96        
cufflinks 0.414        
cufflinks 6.245       High
cufflinks 1.974        
cufflinks 0.661        
cufflinks 0.178       Low
cufflinks 0.937        
cufflinks 1.722        
cufflinks 0.067       Low
cufflinks 1.054        
cufflinks 0.441        

0 Strain