Gene : Glyma.11G177800 G. max Wm82.a2.v1
Defline:  (1 of 20) PTHR10484 - HISTONE H4 Genomic Order:  1778
Name:  ? Glyma.11G177800 Secondary Identifier:  ? PAC:30527808
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G177800 0.5kb upstream 0.5kb upstream 1278 true Chr11: 22583497-22584774 Glycine max
Glyma.11G177800 0.5kb upstream 0.5kb upstream 500 false Chr11: 22583497-22583996 Glycine max
Glyma.11G177800 0.5kb downstream 0.5kb downstream 1278 true Chr11: 22583997-22585274 Glycine max
Glyma.11G177800 0.5kb downstream 0.5kb downstream 500 false Chr11: 22584775-22585274 Glycine max
Glyma.11G177800 1.0kb upstream 1.0kb upstream 1778 true Chr11: 22582997-22584774 Glycine max
Glyma.11G177800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 22582997-22583996 Glycine max
Glyma.11G177800 1.0kb downstream 1.0kb downstream 1778 true Chr11: 22583997-22585774 Glycine max
Glyma.11G177800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 22584775-22585774 Glycine max
Glyma.11G177800 2.0kb upstream 2.0kb upstream 2778 true Chr11: 22581997-22584774 Glycine max
Glyma.11G177800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 22581997-22583996 Glycine max
Glyma.11G177800 2.0kb downstream 2.0kb downstream 2778 true Chr11: 22583997-22586774 Glycine max
Glyma.11G177800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 22584775-22586774 Glycine max
Glyma.11G177800 5.0kb upstream 5.0kb upstream 5778 true Chr11: 22578997-22584774 Glycine max
Glyma.11G177800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 22578997-22583996 Glycine max
Glyma.11G177800 5.0kb downstream 5.0kb downstream 5778 true Chr11: 22583997-22589774 Glycine max
Glyma.11G177800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 22584775-22589774 Glycine max
Glyma.11G177800 10.0kb upstream 10.0kb upstream 10778 true Chr11: 22573997-22584774 Glycine max
Glyma.11G177800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 22573997-22583996 Glycine max
Glyma.11G177800 10.0kb downstream 10.0kb downstream 10778 true Chr11: 22583997-22594774 Glycine max
Glyma.11G177800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 22584775-22594774 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315310 5265 Fabidae View MSA
124071191 5270 Rosid View MSA
123744042 5271 Pentapetalae View MSA
122795736 5272 Eudicot View MSA
122049891 5273 Angiosperm View MSA
121350125 5274 Embryophyte View MSA
123427399 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.60692 0.0 9.20449   Low
cufflinks 27.4658 0.0 74.2697 High  
cufflinks 5.81506 0.0 18.7371   Low
cufflinks 11.6455 0.0 34.0335    
cufflinks 22.4703 0.0 61.4285 High  
cufflinks 30.5245 0.0 82.1536 High  
cufflinks 19.5789 0.0 54.062    
cufflinks 14.0195 0.0 40.1312    
cufflinks 19.2382 0.0 53.2619    
cufflinks 14.629     High  
cufflinks 5.456        
cufflinks 10.822     High  
cufflinks 42.879     High High
cufflinks 58.208     High High
cufflinks 6.561     High  
cufflinks 14.759     High  
cufflinks 6.936     High  
cufflinks 4.263       Low
cufflinks 37.179     High High
cufflinks 9.73     High  
cufflinks 5.403        
cufflinks 14.311     High  
cufflinks 52.309     High High
cufflinks 2.712       Low
cufflinks 12.863     High  
cufflinks 6.461     High  

0 Strain