Gene : Glyma.11G177900 G. max Wm82.a2.v1
Defline:  (1 of 20) PTHR10484 - HISTONE H4 Genomic Order:  1779
Name:  ? Glyma.11G177900 Secondary Identifier:  ? PAC:30527928
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G177900 0.5kb upstream 0.5kb upstream 1180 true Chr11: 22925985-22927164 Glycine max
Glyma.11G177900 0.5kb upstream 0.5kb upstream 500 false Chr11: 22925985-22926484 Glycine max
Glyma.11G177900 0.5kb downstream 0.5kb downstream 1180 true Chr11: 22926485-22927664 Glycine max
Glyma.11G177900 0.5kb downstream 0.5kb downstream 500 false Chr11: 22927165-22927664 Glycine max
Glyma.11G177900 1.0kb upstream 1.0kb upstream 1680 true Chr11: 22925485-22927164 Glycine max
Glyma.11G177900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 22925485-22926484 Glycine max
Glyma.11G177900 1.0kb downstream 1.0kb downstream 1680 true Chr11: 22926485-22928164 Glycine max
Glyma.11G177900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 22927165-22928164 Glycine max
Glyma.11G177900 2.0kb upstream 2.0kb upstream 2680 true Chr11: 22924485-22927164 Glycine max
Glyma.11G177900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 22924485-22926484 Glycine max
Glyma.11G177900 2.0kb downstream 2.0kb downstream 2680 true Chr11: 22926485-22929164 Glycine max
Glyma.11G177900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 22927165-22929164 Glycine max
Glyma.11G177900 5.0kb upstream 5.0kb upstream 5680 true Chr11: 22921485-22927164 Glycine max
Glyma.11G177900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 22921485-22926484 Glycine max
Glyma.11G177900 5.0kb downstream 5.0kb downstream 5680 true Chr11: 22926485-22932164 Glycine max
Glyma.11G177900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 22927165-22932164 Glycine max
Glyma.11G177900 10.0kb upstream 10.0kb upstream 10680 true Chr11: 22916485-22927164 Glycine max
Glyma.11G177900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 22916485-22926484 Glycine max
Glyma.11G177900 10.0kb downstream 10.0kb downstream 10680 true Chr11: 22926485-22937164 Glycine max
Glyma.11G177900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 22927165-22937164 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315310 5265 Fabidae View MSA
124071191 5270 Rosid View MSA
123744042 5271 Pentapetalae View MSA
122795736 5272 Eudicot View MSA
122049891 5273 Angiosperm View MSA
121350125 5274 Embryophyte View MSA
123427399 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.40933 0.0 29.1962   Low
cufflinks 71.6313 0.0 191.739 High High
cufflinks 14.3495 0.0 41.7437    
cufflinks 17.5057 0.0 49.8163    
cufflinks 30.3045 0.0 82.279 High  
cufflinks 42.0983 0.0 112.777 High  
cufflinks 26.191 0.0 71.7637 High  
cufflinks 24.6132 0.0 67.839 High  
cufflinks 30.0839 0.0 81.7153 High  
cufflinks 28.122     High  
cufflinks 27.03     High  
cufflinks 27.485     High  
cufflinks 47.679     High  
cufflinks 63.19     High  
cufflinks 20.188     High  
cufflinks 74.525     High  
cufflinks 17.568     High Low
cufflinks 16.806     High Low
cufflinks 71.166     High  
cufflinks 56.184     High  
cufflinks 26.202     High  
cufflinks 76.271     High  
cufflinks 172.798     High High
cufflinks 15.787     High Low
cufflinks 69.028     High  
cufflinks 29.09     High  

0 Strain