Gene : Glyma.11G178200 G. max Wm82.a2.v1
Defline:  (1 of 20) PTHR10484 - HISTONE H4 Genomic Order:  1782
Name:  ? Glyma.11G178200 Secondary Identifier:  ? PAC:30528414
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G178200 0.5kb upstream 0.5kb upstream 1356 true Chr11: 23003340-23004695 Glycine max
Glyma.11G178200 0.5kb upstream 0.5kb upstream 500 false Chr11: 23003340-23003839 Glycine max
Glyma.11G178200 0.5kb downstream 0.5kb downstream 1356 true Chr11: 23003840-23005195 Glycine max
Glyma.11G178200 0.5kb downstream 0.5kb downstream 500 false Chr11: 23004696-23005195 Glycine max
Glyma.11G178200 1.0kb upstream 1.0kb upstream 1856 true Chr11: 23002840-23004695 Glycine max
Glyma.11G178200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 23002840-23003839 Glycine max
Glyma.11G178200 1.0kb downstream 1.0kb downstream 1856 true Chr11: 23003840-23005695 Glycine max
Glyma.11G178200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 23004696-23005695 Glycine max
Glyma.11G178200 2.0kb upstream 2.0kb upstream 2856 true Chr11: 23001840-23004695 Glycine max
Glyma.11G178200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 23001840-23003839 Glycine max
Glyma.11G178200 2.0kb downstream 2.0kb downstream 2856 true Chr11: 23003840-23006695 Glycine max
Glyma.11G178200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 23004696-23006695 Glycine max
Glyma.11G178200 5.0kb upstream 5.0kb upstream 5856 true Chr11: 22998840-23004695 Glycine max
Glyma.11G178200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 22998840-23003839 Glycine max
Glyma.11G178200 5.0kb downstream 5.0kb downstream 5856 true Chr11: 23003840-23009695 Glycine max
Glyma.11G178200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 23004696-23009695 Glycine max
Glyma.11G178200 10.0kb upstream 10.0kb upstream 10856 true Chr11: 22993840-23004695 Glycine max
Glyma.11G178200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 22993840-23003839 Glycine max
Glyma.11G178200 10.0kb downstream 10.0kb downstream 10856 true Chr11: 23003840-23014695 Glycine max
Glyma.11G178200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 23004696-23014695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315310 5265 Fabidae View MSA
124071191 5270 Rosid View MSA
123744042 5271 Pentapetalae View MSA
122795736 5272 Eudicot View MSA
122049891 5273 Angiosperm View MSA
121350125 5274 Embryophyte View MSA
123427399 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.54986 0.0 15.1739   Low
cufflinks 93.4946 0.0 256.748 High High
cufflinks 13.4556 0.0 38.4586    
cufflinks 23.8923 0.0 64.9888 High  
cufflinks 39.1748 0.0 104.634 High  
cufflinks 71.5772 0.0 193.134 High High
cufflinks 29.464 0.0 79.3563 High  
cufflinks 14.9097 0.0 42.3551    
cufflinks 44.5618 0.0 118.886 High  
cufflinks 23.808     High  
cufflinks 22.048     High  
cufflinks 26.61     High  
cufflinks 62.037     High  
cufflinks 81.786     High  
cufflinks 16.207     High Low
cufflinks 91.13     High High
cufflinks 13.678     High Low
cufflinks 18.057     High  
cufflinks 91.167     High High
cufflinks 56.779     High  
cufflinks 18.354     High  
cufflinks 78.043     High  
cufflinks 204.229     High High
cufflinks 14.748     High Low
cufflinks 87.263     High  
cufflinks 19.538     High  

0 Strain