Gene : Glyma.11G178400 G. max Wm82.a2.v1
Defline:  (1 of 6) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  1784
Name:  ? Glyma.11G178400 Secondary Identifier:  ? PAC:30528237
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G178400 0.5kb upstream 0.5kb upstream 4506 true Chr11: 23616189-23620694 Glycine max
Glyma.11G178400 0.5kb upstream 0.5kb upstream 500 false Chr11: 23616189-23616688 Glycine max
Glyma.11G178400 0.5kb downstream 0.5kb downstream 4506 true Chr11: 23616689-23621194 Glycine max
Glyma.11G178400 0.5kb downstream 0.5kb downstream 500 false Chr11: 23620695-23621194 Glycine max
Glyma.11G178400 1.0kb upstream 1.0kb upstream 5006 true Chr11: 23615689-23620694 Glycine max
Glyma.11G178400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 23615689-23616688 Glycine max
Glyma.11G178400 1.0kb downstream 1.0kb downstream 5006 true Chr11: 23616689-23621694 Glycine max
Glyma.11G178400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 23620695-23621694 Glycine max
Glyma.11G178400 2.0kb upstream 2.0kb upstream 6006 true Chr11: 23614689-23620694 Glycine max
Glyma.11G178400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 23614689-23616688 Glycine max
Glyma.11G178400 2.0kb downstream 2.0kb downstream 6006 true Chr11: 23616689-23622694 Glycine max
Glyma.11G178400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 23620695-23622694 Glycine max
Glyma.11G178400 5.0kb upstream 5.0kb upstream 9006 true Chr11: 23611689-23620694 Glycine max
Glyma.11G178400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 23611689-23616688 Glycine max
Glyma.11G178400 5.0kb downstream 5.0kb downstream 9006 true Chr11: 23616689-23625694 Glycine max
Glyma.11G178400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 23620695-23625694 Glycine max
Glyma.11G178400 10.0kb upstream 10.0kb upstream 14006 true Chr11: 23606689-23620694 Glycine max
Glyma.11G178400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 23606689-23616688 Glycine max
Glyma.11G178400 10.0kb downstream 10.0kb downstream 14006 true Chr11: 23616689-23630694 Glycine max
Glyma.11G178400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 23620695-23630694 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308644 5265 Fabidae View MSA
124069439 5270 Rosid View MSA
123747870 5271 Pentapetalae View MSA
122794639 5272 Eudicot View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.2189 0.0 73.5411 High High
cufflinks 6.0148 0.0 16.9422   Low
cufflinks 40.7888 0.0 113.097 High High
cufflinks 12.7534 0.0 34.1665    
cufflinks 12.5354 0.0 33.556    
cufflinks 19.5819 0.0 52.3116    
cufflinks 6.44625 0.0 17.9984   Low
cufflinks 15.0254 0.0 40.107    
cufflinks 8.71978 0.0 23.7411    
cufflinks 3.702        
cufflinks 6.053     High  
cufflinks 8.037     High High
cufflinks 2.115       Low
cufflinks 1.382       Low
cufflinks 2.9        
cufflinks 5.482        
cufflinks 4.139        
cufflinks 4.314        
cufflinks 3.72        
cufflinks 6.767        
cufflinks 6.444     High  
cufflinks 7.083        
cufflinks 4.632        
cufflinks 8.446     High High
cufflinks 6.38        
cufflinks 6.703     High  

0 Strain