Gene : Glyma.11G179100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31086:SF22 - ALUMINUM-ACTIVATED MALATE TRANSPORTER 1-RELATED Genomic Order:  1791
Name:  ? Glyma.11G179100 Secondary Identifier:  ? PAC:30529834
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G179100 0.5kb upstream 0.5kb upstream 3587 true Chr11: 24433391-24436977 Glycine max
Glyma.11G179100 0.5kb upstream 0.5kb upstream 500 false Chr11: 24433391-24433890 Glycine max
Glyma.11G179100 0.5kb downstream 0.5kb downstream 3587 true Chr11: 24433891-24437477 Glycine max
Glyma.11G179100 0.5kb downstream 0.5kb downstream 500 false Chr11: 24436978-24437477 Glycine max
Glyma.11G179100 1.0kb upstream 1.0kb upstream 4087 true Chr11: 24432891-24436977 Glycine max
Glyma.11G179100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24432891-24433890 Glycine max
Glyma.11G179100 1.0kb downstream 1.0kb downstream 4087 true Chr11: 24433891-24437977 Glycine max
Glyma.11G179100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24436978-24437977 Glycine max
Glyma.11G179100 2.0kb upstream 2.0kb upstream 5087 true Chr11: 24431891-24436977 Glycine max
Glyma.11G179100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24431891-24433890 Glycine max
Glyma.11G179100 2.0kb downstream 2.0kb downstream 5087 true Chr11: 24433891-24438977 Glycine max
Glyma.11G179100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24436978-24438977 Glycine max
Glyma.11G179100 5.0kb upstream 5.0kb upstream 8087 true Chr11: 24428891-24436977 Glycine max
Glyma.11G179100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24428891-24433890 Glycine max
Glyma.11G179100 5.0kb downstream 5.0kb downstream 8087 true Chr11: 24433891-24441977 Glycine max
Glyma.11G179100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24436978-24441977 Glycine max
Glyma.11G179100 10.0kb upstream 10.0kb upstream 13087 true Chr11: 24423891-24436977 Glycine max
Glyma.11G179100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24423891-24433890 Glycine max
Glyma.11G179100 10.0kb downstream 10.0kb downstream 13087 true Chr11: 24433891-24446977 Glycine max
Glyma.11G179100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24436978-24446977 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307255 5265 Fabidae View MSA
124072660 5270 Rosid View MSA
123751083 5271 Pentapetalae View MSA
122790072 5272 Eudicot View MSA
122050187 5273 Angiosperm View MSA
121311787 5274 Embryophyte View MSA
123428514 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.622044 0.0 2.28375    
cufflinks 0.142294 0.0 0.557868 Low  
cufflinks 0.238623 0.0 0.914661    
cufflinks 0.920931 0.0 3.29492    
cufflinks 0.0924328 0.0 0.368341 Low  
cufflinks 0.0501956 0.0 0.205226 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.0153 0.0 6.68532   High
cufflinks 0.337371 0.0 1.27545    
cufflinks 2.186       High
cufflinks 0.023     Low Low
cufflinks 0.378        
cufflinks 0.109        
cufflinks 0.28        
cufflinks 0.019     Low Low
cufflinks 3.248       High
cufflinks 0.106        
cufflinks 0.423        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.864        
cufflinks 0.019     Low Low
cufflinks 1.4        
cufflinks 0.274        
cufflinks 0.006     Low Low
cufflinks 2.892       High
cufflinks 0.11        

0 Strain