Gene : Glyma.11G179600 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK5 Genomic Order:  1796
Name:  ? Glyma.11G179600 Secondary Identifier:  ? PAC:30530221
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G179600 0.5kb upstream 0.5kb upstream 10329 true Chr11: 24521679-24532007 Glycine max
Glyma.11G179600 0.5kb upstream 0.5kb upstream 500 false Chr11: 24521679-24522178 Glycine max
Glyma.11G179600 0.5kb downstream 0.5kb downstream 10329 true Chr11: 24522179-24532507 Glycine max
Glyma.11G179600 0.5kb downstream 0.5kb downstream 500 false Chr11: 24532008-24532507 Glycine max
Glyma.11G179600 1.0kb upstream 1.0kb upstream 10829 true Chr11: 24521179-24532007 Glycine max
Glyma.11G179600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24521179-24522178 Glycine max
Glyma.11G179600 1.0kb downstream 1.0kb downstream 10829 true Chr11: 24522179-24533007 Glycine max
Glyma.11G179600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24532008-24533007 Glycine max
Glyma.11G179600 2.0kb upstream 2.0kb upstream 11829 true Chr11: 24520179-24532007 Glycine max
Glyma.11G179600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24520179-24522178 Glycine max
Glyma.11G179600 2.0kb downstream 2.0kb downstream 11829 true Chr11: 24522179-24534007 Glycine max
Glyma.11G179600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24532008-24534007 Glycine max
Glyma.11G179600 5.0kb upstream 5.0kb upstream 14829 true Chr11: 24517179-24532007 Glycine max
Glyma.11G179600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24517179-24522178 Glycine max
Glyma.11G179600 5.0kb downstream 5.0kb downstream 14829 true Chr11: 24522179-24537007 Glycine max
Glyma.11G179600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24532008-24537007 Glycine max
Glyma.11G179600 10.0kb upstream 10.0kb upstream 19829 true Chr11: 24512179-24532007 Glycine max
Glyma.11G179600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24512179-24522178 Glycine max
Glyma.11G179600 10.0kb downstream 10.0kb downstream 19829 true Chr11: 24522179-24542007 Glycine max
Glyma.11G179600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24532008-24542007 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309247 5265 Fabidae View MSA
124063961 5270 Rosid View MSA
123747232 5271 Pentapetalae View MSA
122789599 5272 Eudicot View MSA
122047293 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.433414 0.0 2.83197   Low
cufflinks 10.4373 0.0 37.0944   High
cufflinks 1.14276 0.0 5.70148    
cufflinks 1.60326 0.0 9.86975    
cufflinks 15.0504 0.0 55.6274   High
cufflinks 7.77545 0.0 27.3729    
cufflinks 3.21924 0.0 10.3843    
cufflinks 3.547 0.0 11.2689    
cufflinks 4.15117 0.0 13.0958    
cufflinks 3.255        
cufflinks 0.085       Low
cufflinks 0.744        
cufflinks 3.514        
cufflinks 4.182       High
cufflinks 0.021     Low Low
cufflinks 2.049        
cufflinks 0.153        
cufflinks 2.336        
cufflinks 1.707        
cufflinks 2.28        
cufflinks 0.204        
cufflinks 2.27        
cufflinks 1.752        
cufflinks 0.044     Low Low
cufflinks 2.245        
cufflinks 0.477        

0 Strain