Gene : Glyma.11G227900 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG2975 - Translation initiation factor 3, subunit f (eIF-3f) Genomic Order:  2279
Name:  ? Glyma.11G227900 Secondary Identifier:  ? PAC:30530274
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G227900 0.5kb upstream 0.5kb upstream 4705 true Chr11: 32301552-32306256 Glycine max
Glyma.11G227900 0.5kb upstream 0.5kb upstream 500 false Chr11: 32305757-32306256 Glycine max
Glyma.11G227900 0.5kb downstream 0.5kb downstream 4705 true Chr11: 32301052-32305756 Glycine max
Glyma.11G227900 0.5kb downstream 0.5kb downstream 500 false Chr11: 32301052-32301551 Glycine max
Glyma.11G227900 1.0kb upstream 1.0kb upstream 5205 true Chr11: 32301552-32306756 Glycine max
Glyma.11G227900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32305757-32306756 Glycine max
Glyma.11G227900 1.0kb downstream 1.0kb downstream 5205 true Chr11: 32300552-32305756 Glycine max
Glyma.11G227900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32300552-32301551 Glycine max
Glyma.11G227900 2.0kb upstream 2.0kb upstream 6205 true Chr11: 32301552-32307756 Glycine max
Glyma.11G227900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32305757-32307756 Glycine max
Glyma.11G227900 2.0kb downstream 2.0kb downstream 6205 true Chr11: 32299552-32305756 Glycine max
Glyma.11G227900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32299552-32301551 Glycine max
Glyma.11G227900 5.0kb upstream 5.0kb upstream 9205 true Chr11: 32301552-32310756 Glycine max
Glyma.11G227900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32305757-32310756 Glycine max
Glyma.11G227900 5.0kb downstream 5.0kb downstream 9205 true Chr11: 32296552-32305756 Glycine max
Glyma.11G227900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32296552-32301551 Glycine max
Glyma.11G227900 10.0kb upstream 10.0kb upstream 14205 true Chr11: 32301552-32315756 Glycine max
Glyma.11G227900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32305757-32315756 Glycine max
Glyma.11G227900 10.0kb downstream 10.0kb downstream 14205 true Chr11: 32291552-32305756 Glycine max
Glyma.11G227900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32291552-32301551 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308957 5265 Fabidae View MSA
124064215 5270 Rosid View MSA
123739759 5271 Pentapetalae View MSA
122793083 5272 Eudicot View MSA
122044125 5273 Angiosperm View MSA
121349154 5274 Embryophyte View MSA
123428358 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.958 0.0 91.9244 High Low
cufflinks 40.1877 0.0 144.949 High  
cufflinks 25.1243 0.0 87.3275 High Low
cufflinks 34.13 0.0 102.202 High  
cufflinks 58.8884 0.0 219.244 High High
cufflinks 44.1978 0.0 158.922 High  
cufflinks 44.3805 0.0 159.223 High  
cufflinks 46.2618 0.0 142.458 High  
cufflinks 48.5451 0.0 174.854 High  
cufflinks 5.504        
cufflinks 1.393       Low
cufflinks 3.548        
cufflinks 8.543     High High
cufflinks 10.572     High High
cufflinks 2.033        
cufflinks 3.314        
cufflinks 2.91        
cufflinks 4.319        
cufflinks 5.232        
cufflinks 2.779        
cufflinks 2.258        
cufflinks 2.841        
cufflinks 4.588        
cufflinks 1.711       Low
cufflinks 2.926        
cufflinks 2.759        

0 Strain