Gene : Glyma.11G228100 G. max Wm82.a2.v1
Defline:  (1 of 4) PF07014 - Hs1pro-1 protein C-terminus (Hs1pro-1_C) Genomic Order:  2281
Name:  ? Glyma.11G228100 Secondary Identifier:  ? PAC:30529326
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G228100 0.5kb upstream 0.5kb upstream 2382 true Chr11: 32323163-32325544 Glycine max
Glyma.11G228100 0.5kb upstream 0.5kb upstream 500 false Chr11: 32325045-32325544 Glycine max
Glyma.11G228100 0.5kb downstream 0.5kb downstream 2382 true Chr11: 32322663-32325044 Glycine max
Glyma.11G228100 0.5kb downstream 0.5kb downstream 500 false Chr11: 32322663-32323162 Glycine max
Glyma.11G228100 1.0kb upstream 1.0kb upstream 2882 true Chr11: 32323163-32326044 Glycine max
Glyma.11G228100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32325045-32326044 Glycine max
Glyma.11G228100 1.0kb downstream 1.0kb downstream 2882 true Chr11: 32322163-32325044 Glycine max
Glyma.11G228100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32322163-32323162 Glycine max
Glyma.11G228100 2.0kb upstream 2.0kb upstream 3882 true Chr11: 32323163-32327044 Glycine max
Glyma.11G228100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32325045-32327044 Glycine max
Glyma.11G228100 2.0kb downstream 2.0kb downstream 3882 true Chr11: 32321163-32325044 Glycine max
Glyma.11G228100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32321163-32323162 Glycine max
Glyma.11G228100 5.0kb upstream 5.0kb upstream 6882 true Chr11: 32323163-32330044 Glycine max
Glyma.11G228100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32325045-32330044 Glycine max
Glyma.11G228100 5.0kb downstream 5.0kb downstream 6882 true Chr11: 32318163-32325044 Glycine max
Glyma.11G228100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32318163-32323162 Glycine max
Glyma.11G228100 10.0kb upstream 10.0kb upstream 11882 true Chr11: 32323163-32335044 Glycine max
Glyma.11G228100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32325045-32335044 Glycine max
Glyma.11G228100 10.0kb downstream 10.0kb downstream 11882 true Chr11: 32313163-32325044 Glycine max
Glyma.11G228100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32313163-32323162 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306387 5265 Fabidae View MSA
124067891 5270 Rosid View MSA
123747109 5271 Pentapetalae View MSA
122789570 5272 Eudicot View MSA
122043569 5273 Angiosperm View MSA
121344481 5274 Embryophyte View MSA
123380055 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9076 0.0 45.1554    
cufflinks 1.30114 0.0 4.41695    
cufflinks 30.3908 0.0 82.9904 High High
cufflinks 1.37431 0.0 4.62944    
cufflinks 9.09505 0.0 24.5073    
cufflinks 24.7471 0.0 66.9542 High High
cufflinks 0.365669 0.0 1.35867   Low
cufflinks 3.22403 0.0 9.63993    
cufflinks 7.46072 0.0 20.3676    
cufflinks 56.633     High  
cufflinks 164.172     High  
cufflinks 46.186     High  
cufflinks 18.888     High  
cufflinks 8.715     High  
cufflinks 184.467     High High
cufflinks 7.524     High  
cufflinks 872.343     High High
cufflinks 17.071     High  
cufflinks 1.897       Low
cufflinks 3.068       Low
cufflinks 159.322     High  
cufflinks 4.612        
cufflinks 4.089       Low
cufflinks 138.417     High  
cufflinks 2.844       Low
cufflinks 275.294     High High

0 Strain