Gene : Glyma.11G228200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR21141:SF3 - 60S ACIDIC RIBOSOMAL PROTEIN P0 Genomic Order:  2282
Name:  ? Glyma.11G228200 Secondary Identifier:  ? PAC:30527958
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G228200 0.5kb upstream 0.5kb upstream 3106 true Chr11: 32346356-32349461 Glycine max
Glyma.11G228200 0.5kb upstream 0.5kb upstream 500 false Chr11: 32348962-32349461 Glycine max
Glyma.11G228200 0.5kb downstream 0.5kb downstream 3106 true Chr11: 32345856-32348961 Glycine max
Glyma.11G228200 0.5kb downstream 0.5kb downstream 500 false Chr11: 32345856-32346355 Glycine max
Glyma.11G228200 1.0kb upstream 1.0kb upstream 3606 true Chr11: 32346356-32349961 Glycine max
Glyma.11G228200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32348962-32349961 Glycine max
Glyma.11G228200 1.0kb downstream 1.0kb downstream 3606 true Chr11: 32345356-32348961 Glycine max
Glyma.11G228200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32345356-32346355 Glycine max
Glyma.11G228200 2.0kb upstream 2.0kb upstream 4606 true Chr11: 32346356-32350961 Glycine max
Glyma.11G228200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32348962-32350961 Glycine max
Glyma.11G228200 2.0kb downstream 2.0kb downstream 4606 true Chr11: 32344356-32348961 Glycine max
Glyma.11G228200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32344356-32346355 Glycine max
Glyma.11G228200 5.0kb upstream 5.0kb upstream 7606 true Chr11: 32346356-32353961 Glycine max
Glyma.11G228200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32348962-32353961 Glycine max
Glyma.11G228200 5.0kb downstream 5.0kb downstream 7606 true Chr11: 32341356-32348961 Glycine max
Glyma.11G228200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32341356-32346355 Glycine max
Glyma.11G228200 10.0kb upstream 10.0kb upstream 12606 true Chr11: 32346356-32358961 Glycine max
Glyma.11G228200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32348962-32358961 Glycine max
Glyma.11G228200 10.0kb downstream 10.0kb downstream 12606 true Chr11: 32336356-32348961 Glycine max
Glyma.11G228200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32336356-32346355 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254344 5265 Fabidae View MSA
123996547 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0352026 0.0 0.155818 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.153        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.53        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain