Gene : Glyma.11G228800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Genomic Order:  2288
Name:  ? Glyma.11G228800 Secondary Identifier:  ? PAC:30528299
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G228800 0.5kb upstream 0.5kb upstream 4433 true Chr11: 32398995-32403427 Glycine max
Glyma.11G228800 0.5kb upstream 0.5kb upstream 500 false Chr11: 32402928-32403427 Glycine max
Glyma.11G228800 0.5kb downstream 0.5kb downstream 4433 true Chr11: 32398495-32402927 Glycine max
Glyma.11G228800 0.5kb downstream 0.5kb downstream 500 false Chr11: 32398495-32398994 Glycine max
Glyma.11G228800 1.0kb upstream 1.0kb upstream 4933 true Chr11: 32398995-32403927 Glycine max
Glyma.11G228800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32402928-32403927 Glycine max
Glyma.11G228800 1.0kb downstream 1.0kb downstream 4933 true Chr11: 32397995-32402927 Glycine max
Glyma.11G228800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32397995-32398994 Glycine max
Glyma.11G228800 2.0kb upstream 2.0kb upstream 5933 true Chr11: 32398995-32404927 Glycine max
Glyma.11G228800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32402928-32404927 Glycine max
Glyma.11G228800 2.0kb downstream 2.0kb downstream 5933 true Chr11: 32396995-32402927 Glycine max
Glyma.11G228800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32396995-32398994 Glycine max
Glyma.11G228800 5.0kb upstream 5.0kb upstream 8933 true Chr11: 32398995-32407927 Glycine max
Glyma.11G228800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32402928-32407927 Glycine max
Glyma.11G228800 5.0kb downstream 5.0kb downstream 8933 true Chr11: 32393995-32402927 Glycine max
Glyma.11G228800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32393995-32398994 Glycine max
Glyma.11G228800 10.0kb upstream 10.0kb upstream 13933 true Chr11: 32398995-32412927 Glycine max
Glyma.11G228800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32402928-32412927 Glycine max
Glyma.11G228800 10.0kb downstream 10.0kb downstream 13933 true Chr11: 32388995-32402927 Glycine max
Glyma.11G228800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32388995-32398994 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780059 5273 Angiosperm View MSA
122301220 5265 Fabidae View MSA
124050329 5270 Rosid View MSA
123744936 5271 Pentapetalae View MSA
122771305 5272 Eudicot View MSA
121051692 5274 Embryophyte View MSA
123428168 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6232 0.0 34.2522   High
cufflinks 9.93508 0.0 27.5014    
cufflinks 2.42506 0.0 8.1076    
cufflinks 9.05809 0.0 25.263    
cufflinks 0.237362 0.0 0.915125   Low
cufflinks 0.429903 0.0 1.61777   Low
cufflinks 7.19689 0.0 20.4744    
cufflinks 0.9992 0.0 3.59735    
cufflinks 0.466902 0.0 1.75139    
cufflinks 0.26        
cufflinks 0.015     Low Low
cufflinks 1.03        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low Low
cufflinks 8.318     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.525        
cufflinks 1.994        
cufflinks 6.363        
cufflinks 0.005     Low Low
cufflinks 6.484        
cufflinks 3.309        
cufflinks 0.005     Low Low
cufflinks 9.123     High High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain