Gene : Glyma.11G229100 G. max Wm82.a2.v1
Defline:  (1 of 1) PF10457 - Cholesterol-capturing domain (MENTAL) Genomic Order:  2291
Name:  ? Glyma.11G229100 Secondary Identifier:  ? PAC:30529645
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G229100 0.5kb upstream 0.5kb upstream 3729 true Chr11: 32444999-32448727 Glycine max
Glyma.11G229100 0.5kb upstream 0.5kb upstream 500 false Chr11: 32448228-32448727 Glycine max
Glyma.11G229100 0.5kb downstream 0.5kb downstream 3729 true Chr11: 32444499-32448227 Glycine max
Glyma.11G229100 0.5kb downstream 0.5kb downstream 500 false Chr11: 32444499-32444998 Glycine max
Glyma.11G229100 1.0kb upstream 1.0kb upstream 4229 true Chr11: 32444999-32449227 Glycine max
Glyma.11G229100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32448228-32449227 Glycine max
Glyma.11G229100 1.0kb downstream 1.0kb downstream 4229 true Chr11: 32443999-32448227 Glycine max
Glyma.11G229100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32443999-32444998 Glycine max
Glyma.11G229100 2.0kb upstream 2.0kb upstream 5229 true Chr11: 32444999-32450227 Glycine max
Glyma.11G229100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32448228-32450227 Glycine max
Glyma.11G229100 2.0kb downstream 2.0kb downstream 5229 true Chr11: 32442999-32448227 Glycine max
Glyma.11G229100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32442999-32444998 Glycine max
Glyma.11G229100 5.0kb upstream 5.0kb upstream 8229 true Chr11: 32444999-32453227 Glycine max
Glyma.11G229100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32448228-32453227 Glycine max
Glyma.11G229100 5.0kb downstream 5.0kb downstream 8229 true Chr11: 32439999-32448227 Glycine max
Glyma.11G229100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32439999-32444998 Glycine max
Glyma.11G229100 10.0kb upstream 10.0kb upstream 13229 true Chr11: 32444999-32458227 Glycine max
Glyma.11G229100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32448228-32458227 Glycine max
Glyma.11G229100 10.0kb downstream 10.0kb downstream 13229 true Chr11: 32434999-32448227 Glycine max
Glyma.11G229100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32434999-32444998 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307328 5265 Fabidae View MSA
124066621 5270 Rosid View MSA
123741764 5271 Pentapetalae View MSA
122789976 5272 Eudicot View MSA
122043684 5273 Angiosperm View MSA
121346318 5274 Embryophyte View MSA
123380366 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.8727 0.0 125.768 High High
cufflinks 4.54119 0.0 19.7906    
cufflinks 32.4816 0.0 111.808 High  
cufflinks 3.13906 0.0 15.6173   Low
cufflinks 20.0252 0.0 69.8991 High  
cufflinks 27.4351 0.0 94.353 High  
cufflinks 1.13859 0.0 5.21728   Low
cufflinks 12.8071 0.0 48.7846    
cufflinks 17.5613 0.0 62.2768    
cufflinks 5.939        
cufflinks 26.321     High High
cufflinks 5.059        
cufflinks 3.828        
cufflinks 2.934        
cufflinks 8.126     High  
cufflinks 1.958        
cufflinks 14.337     High  
cufflinks 1.34       Low
cufflinks 1.761        
cufflinks 1.377       Low
cufflinks 29.348     High High
cufflinks 1.601        
cufflinks 1.729        
cufflinks 21.538     High High
cufflinks 1.606        
cufflinks 21.124     High High

0 Strain