Gene : Glyma.11G230700 G. max Wm82.a2.v1
Defline:  (1 of 1) PF02861//PF07724 - Clp amino terminal domain, pathogenicity island component (Clp_N) // AAA domain (Cdc48 subfamily) (AAA_2) Genomic Order:  2307
Name:  ? Glyma.11G230700 Secondary Identifier:  ? PAC:30527883
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G230700 0.5kb upstream 0.5kb upstream 5799 true Chr11: 32617999-32623797 Glycine max
Glyma.11G230700 0.5kb upstream 0.5kb upstream 500 false Chr11: 32617999-32618498 Glycine max
Glyma.11G230700 0.5kb downstream 0.5kb downstream 5799 true Chr11: 32618499-32624297 Glycine max
Glyma.11G230700 0.5kb downstream 0.5kb downstream 500 false Chr11: 32623798-32624297 Glycine max
Glyma.11G230700 1.0kb upstream 1.0kb upstream 6299 true Chr11: 32617499-32623797 Glycine max
Glyma.11G230700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32617499-32618498 Glycine max
Glyma.11G230700 1.0kb downstream 1.0kb downstream 6299 true Chr11: 32618499-32624797 Glycine max
Glyma.11G230700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32623798-32624797 Glycine max
Glyma.11G230700 2.0kb upstream 2.0kb upstream 7299 true Chr11: 32616499-32623797 Glycine max
Glyma.11G230700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32616499-32618498 Glycine max
Glyma.11G230700 2.0kb downstream 2.0kb downstream 7299 true Chr11: 32618499-32625797 Glycine max
Glyma.11G230700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32623798-32625797 Glycine max
Glyma.11G230700 5.0kb upstream 5.0kb upstream 10299 true Chr11: 32613499-32623797 Glycine max
Glyma.11G230700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32613499-32618498 Glycine max
Glyma.11G230700 5.0kb downstream 5.0kb downstream 10299 true Chr11: 32618499-32628797 Glycine max
Glyma.11G230700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32623798-32628797 Glycine max
Glyma.11G230700 10.0kb upstream 10.0kb upstream 15299 true Chr11: 32608499-32623797 Glycine max
Glyma.11G230700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32608499-32618498 Glycine max
Glyma.11G230700 10.0kb downstream 10.0kb downstream 15299 true Chr11: 32618499-32633797 Glycine max
Glyma.11G230700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32623798-32633797 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308455 5265 Fabidae View MSA
124066769 5270 Rosid View MSA
123749944 5271 Pentapetalae View MSA
122787695 5272 Eudicot View MSA
122043701 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.959 0.0 43.8476    
cufflinks 16.6187 0.0 45.7417    
cufflinks 2.85257 0.0 8.00411   Low
cufflinks 23.3973 0.0 66.8211 High  
cufflinks 7.54876 0.0 20.1392    
cufflinks 2.42005 0.0 6.88778   Low
cufflinks 9.30069 0.0 24.8641    
cufflinks 46.0327 0.0 145.93 High High
cufflinks 10.8588 0.0 29.162    
cufflinks 10.087     High High
cufflinks 0.893       Low
cufflinks 3.128        
cufflinks 2.581        
cufflinks 2.018        
cufflinks 0.991       Low
cufflinks 5.951        
cufflinks 2.663        
cufflinks 5.157        
cufflinks 11.344     High High
cufflinks 4.763        
cufflinks 1.384        
cufflinks 8.165     High High
cufflinks 6.018        
cufflinks 0.694       Low
cufflinks 5.981        
cufflinks 0.891       Low

0 Strain