Gene : Glyma.11G231100 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10292 - CLATHRIN HEAVY CHAIN Genomic Order:  2311
Name:  ? Glyma.11G231100 Secondary Identifier:  ? PAC:30530462
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G231100 0.5kb upstream 0.5kb upstream 12741 true Chr11: 32670543-32683283 Glycine max
Glyma.11G231100 0.5kb upstream 0.5kb upstream 500 false Chr11: 32670543-32671042 Glycine max
Glyma.11G231100 0.5kb downstream 0.5kb downstream 12741 true Chr11: 32671043-32683783 Glycine max
Glyma.11G231100 0.5kb downstream 0.5kb downstream 500 false Chr11: 32683284-32683783 Glycine max
Glyma.11G231100 1.0kb upstream 1.0kb upstream 13241 true Chr11: 32670043-32683283 Glycine max
Glyma.11G231100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32670043-32671042 Glycine max
Glyma.11G231100 1.0kb downstream 1.0kb downstream 13241 true Chr11: 32671043-32684283 Glycine max
Glyma.11G231100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32683284-32684283 Glycine max
Glyma.11G231100 2.0kb upstream 2.0kb upstream 14241 true Chr11: 32669043-32683283 Glycine max
Glyma.11G231100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32669043-32671042 Glycine max
Glyma.11G231100 2.0kb downstream 2.0kb downstream 14241 true Chr11: 32671043-32685283 Glycine max
Glyma.11G231100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32683284-32685283 Glycine max
Glyma.11G231100 5.0kb upstream 5.0kb upstream 17241 true Chr11: 32666043-32683283 Glycine max
Glyma.11G231100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32666043-32671042 Glycine max
Glyma.11G231100 5.0kb downstream 5.0kb downstream 17241 true Chr11: 32671043-32688283 Glycine max
Glyma.11G231100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32683284-32688283 Glycine max
Glyma.11G231100 10.0kb upstream 10.0kb upstream 22241 true Chr11: 32661043-32683283 Glycine max
Glyma.11G231100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32661043-32671042 Glycine max
Glyma.11G231100 10.0kb downstream 10.0kb downstream 22241 true Chr11: 32671043-32693283 Glycine max
Glyma.11G231100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32683284-32693283 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027117 5273 Angiosperm View MSA
122311720 5265 Fabidae View MSA
124064401 5270 Rosid View MSA
123744166 5271 Pentapetalae View MSA
122788856 5272 Eudicot View MSA
121350817 5274 Embryophyte View MSA
123428843 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.708 0.0 44.8924    
cufflinks 15.4519 0.0 44.1218    
cufflinks 11.811 0.0 32.8295   Low
cufflinks 19.8245 0.0 58.5639    
cufflinks 34.978 0.0 113.567 High High
cufflinks 19.2472 0.0 56.573    
cufflinks 13.4229 0.0 37.5957    
cufflinks 23.9202 0.0 72.8054 High  
cufflinks 20.9881 0.0 62.5366 High  
cufflinks 24.61     High High
cufflinks 5.809     High  
cufflinks 8.497     High  
cufflinks 29.392     High High
cufflinks 34.606     High High
cufflinks 6.289     High  
cufflinks 8.337     High  
cufflinks 9.492     High  
cufflinks 15.006     High  
cufflinks 13.293     High  
cufflinks 5.455       Low
cufflinks 10.413     High  
cufflinks 6.802        
cufflinks 7.977     High  
cufflinks 7.726     High  
cufflinks 5.647       Low
cufflinks 8.572     High  

0 Strain