Gene : Glyma.11G232000 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR14030//PTHR14030:SF2 - MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 Genomic Order:  2320
Name:  ? Glyma.11G232000 Secondary Identifier:  ? PAC:30531288

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G232000 0.5kb upstream 0.5kb upstream 3132 true Chr11: 32754320-32757451 Glycine max
Glyma.11G232000 0.5kb upstream 0.5kb upstream 500 false Chr11: 32754320-32754819 Glycine max
Glyma.11G232000 0.5kb downstream 0.5kb downstream 3132 true Chr11: 32754820-32757951 Glycine max
Glyma.11G232000 0.5kb downstream 0.5kb downstream 500 false Chr11: 32757452-32757951 Glycine max
Glyma.11G232000 1.0kb upstream 1.0kb upstream 3632 true Chr11: 32753820-32757451 Glycine max
Glyma.11G232000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32753820-32754819 Glycine max
Glyma.11G232000 1.0kb downstream 1.0kb downstream 3632 true Chr11: 32754820-32758451 Glycine max
Glyma.11G232000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32757452-32758451 Glycine max
Glyma.11G232000 2.0kb upstream 2.0kb upstream 4632 true Chr11: 32752820-32757451 Glycine max
Glyma.11G232000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32752820-32754819 Glycine max
Glyma.11G232000 2.0kb downstream 2.0kb downstream 4632 true Chr11: 32754820-32759451 Glycine max
Glyma.11G232000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32757452-32759451 Glycine max
Glyma.11G232000 5.0kb upstream 5.0kb upstream 7632 true Chr11: 32749820-32757451 Glycine max
Glyma.11G232000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32749820-32754819 Glycine max
Glyma.11G232000 5.0kb downstream 5.0kb downstream 7632 true Chr11: 32754820-32762451 Glycine max
Glyma.11G232000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32757452-32762451 Glycine max
Glyma.11G232000 10.0kb upstream 10.0kb upstream 12632 true Chr11: 32744820-32757451 Glycine max
Glyma.11G232000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32744820-32754819 Glycine max
Glyma.11G232000 10.0kb downstream 10.0kb downstream 12632 true Chr11: 32754820-32767451 Glycine max
Glyma.11G232000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32757452-32767451 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040950 5273 Angiosperm View MSA
122302314 5265 Fabidae View MSA
124070685 5270 Rosid View MSA
123736871 5271 Pentapetalae View MSA
122786848 5272 Eudicot View MSA
121350124 5274 Embryophyte View MSA
123427088 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0112545 0.0 0.0508985 Low Low
cufflinks 1.97034 0.0 6.42417    
cufflinks 0.0857817 0.0 0.340437 Low Low
cufflinks 0.832077 0.0 2.96208    
cufflinks 3.2095 0.0 9.74373    
cufflinks 2.50908 0.0 7.90286    
cufflinks 1.04373 0.0 3.65178    
cufflinks 1.09974 0.0 3.82552    
cufflinks 1.92827 0.0 6.2995    
cufflinks 1.437        
cufflinks 0.094       Low
cufflinks 0.535        
cufflinks 3.079       High
cufflinks 4.645       High
cufflinks 0.114       Low
cufflinks 1.426        
cufflinks 0.278        
cufflinks 0.295        
cufflinks 2.245       High
cufflinks 0.993        
cufflinks 0.189       Low
cufflinks 1.053        
cufflinks 1.864        
cufflinks 0.118       Low
cufflinks 0.912        
cufflinks 0.405        

0 Strain