Gene : Glyma.11G232900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24031:SF2 - ATP-DEPENDENT RNA HELICASE DDX55 Genomic Order:  2329
Name:  ? Glyma.11G232900 Secondary Identifier:  ? PAC:30529438
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G232900 0.5kb upstream 0.5kb upstream 5641 true Chr11: 32824430-32830070 Glycine max
Glyma.11G232900 0.5kb upstream 0.5kb upstream 500 false Chr11: 32829571-32830070 Glycine max
Glyma.11G232900 0.5kb downstream 0.5kb downstream 5641 true Chr11: 32823930-32829570 Glycine max
Glyma.11G232900 0.5kb downstream 0.5kb downstream 500 false Chr11: 32823930-32824429 Glycine max
Glyma.11G232900 1.0kb upstream 1.0kb upstream 6141 true Chr11: 32824430-32830570 Glycine max
Glyma.11G232900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32829571-32830570 Glycine max
Glyma.11G232900 1.0kb downstream 1.0kb downstream 6141 true Chr11: 32823430-32829570 Glycine max
Glyma.11G232900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32823430-32824429 Glycine max
Glyma.11G232900 2.0kb upstream 2.0kb upstream 7141 true Chr11: 32824430-32831570 Glycine max
Glyma.11G232900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32829571-32831570 Glycine max
Glyma.11G232900 2.0kb downstream 2.0kb downstream 7141 true Chr11: 32822430-32829570 Glycine max
Glyma.11G232900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32822430-32824429 Glycine max
Glyma.11G232900 5.0kb upstream 5.0kb upstream 10141 true Chr11: 32824430-32834570 Glycine max
Glyma.11G232900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32829571-32834570 Glycine max
Glyma.11G232900 5.0kb downstream 5.0kb downstream 10141 true Chr11: 32819430-32829570 Glycine max
Glyma.11G232900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32819430-32824429 Glycine max
Glyma.11G232900 10.0kb upstream 10.0kb upstream 15141 true Chr11: 32824430-32839570 Glycine max
Glyma.11G232900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32829571-32839570 Glycine max
Glyma.11G232900 10.0kb downstream 10.0kb downstream 15141 true Chr11: 32814430-32829570 Glycine max
Glyma.11G232900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32814430-32824429 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306552 5265 Fabidae View MSA
124068016 5270 Rosid View MSA
123739491 5271 Pentapetalae View MSA
122792074 5272 Eudicot View MSA
122042767 5273 Angiosperm View MSA
123429160 5275 Viridiplantae View MSA
121346858 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.59491 0.0 25.9105    
cufflinks 3.63079 0.0 20.5606    
cufflinks 4.75835 0.0 26.5566    
cufflinks 5.7089 0.0 26.3824    
cufflinks 5.12156 0.0 24.4997    
cufflinks 3.02326 0.0 11.6009   Low
cufflinks 5.87461 0.0 28.5748   High
cufflinks 3.82363 0.0 17.9667    
cufflinks 4.35368 0.0 17.3868    
cufflinks 0.314       Low
cufflinks 0.563        
cufflinks 0.591        
cufflinks 0.543        
cufflinks 0.687       High
cufflinks 0.56        
cufflinks 0.318       Low
cufflinks 0.306       Low
cufflinks 0.482        
cufflinks 0.445        
cufflinks 0.297       Low
cufflinks 0.585        
cufflinks 0.336        
cufflinks 0.375        
cufflinks 0.626       High
cufflinks 0.275       Low
cufflinks 0.43        

0 Strain