Gene : Glyma.11G233000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15071 - CATION-DEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR Genomic Order:  2330
Name:  ? Glyma.11G233000 Secondary Identifier:  ? PAC:30530944
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G233000 0.5kb upstream 0.5kb upstream 7900 true Chr11: 32831291-32839190 Glycine max
Glyma.11G233000 0.5kb upstream 0.5kb upstream 500 false Chr11: 32831291-32831790 Glycine max
Glyma.11G233000 0.5kb downstream 0.5kb downstream 7900 true Chr11: 32831791-32839690 Glycine max
Glyma.11G233000 0.5kb downstream 0.5kb downstream 500 false Chr11: 32839191-32839690 Glycine max
Glyma.11G233000 1.0kb upstream 1.0kb upstream 8400 true Chr11: 32830791-32839190 Glycine max
Glyma.11G233000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32830791-32831790 Glycine max
Glyma.11G233000 1.0kb downstream 1.0kb downstream 8400 true Chr11: 32831791-32840190 Glycine max
Glyma.11G233000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32839191-32840190 Glycine max
Glyma.11G233000 2.0kb upstream 2.0kb upstream 9400 true Chr11: 32829791-32839190 Glycine max
Glyma.11G233000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32829791-32831790 Glycine max
Glyma.11G233000 2.0kb downstream 2.0kb downstream 9400 true Chr11: 32831791-32841190 Glycine max
Glyma.11G233000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32839191-32841190 Glycine max
Glyma.11G233000 5.0kb upstream 5.0kb upstream 12400 true Chr11: 32826791-32839190 Glycine max
Glyma.11G233000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32826791-32831790 Glycine max
Glyma.11G233000 5.0kb downstream 5.0kb downstream 12400 true Chr11: 32831791-32844190 Glycine max
Glyma.11G233000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32839191-32844190 Glycine max
Glyma.11G233000 10.0kb upstream 10.0kb upstream 17400 true Chr11: 32821791-32839190 Glycine max
Glyma.11G233000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32821791-32831790 Glycine max
Glyma.11G233000 10.0kb downstream 10.0kb downstream 17400 true Chr11: 32831791-32849190 Glycine max
Glyma.11G233000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32839191-32849190 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305353 5265 Fabidae View MSA
124061668 5270 Rosid View MSA
123744044 5271 Pentapetalae View MSA
122786177 5272 Eudicot View MSA
122046293 5273 Angiosperm View MSA
121344129 5274 Embryophyte View MSA
123379979 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.05342 0.0 26.1943   High
cufflinks 3.2137 0.0 10.7569   Low
cufflinks 3.04252 0.0 14.5505   Low
cufflinks 4.91769 0.0 18.7364    
cufflinks 5.30457 0.0 23.6596    
cufflinks 5.34048 0.0 23.6265    
cufflinks 3.24713 0.0 11.0047   Low
cufflinks 5.24262 0.0 23.2121    
cufflinks 4.56403 0.0 13.7894    
cufflinks 0.621        
cufflinks 0.235       Low
cufflinks 0.347        
cufflinks 0.504        
cufflinks 0.616        
cufflinks 0.245       Low
cufflinks 0.402        
cufflinks 1.038       High
cufflinks 0.529        
cufflinks 0.343        
cufflinks 0.48        
cufflinks 0.245       Low
cufflinks 0.477        
cufflinks 0.549        
cufflinks 0.258       Low
cufflinks 0.442        
cufflinks 0.288        

0 Strain